Gene detail

Detail information of GWHGAAEX015849/evm.TU.scaffold_70.28

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|408402717\|ref\|YP_006860700.1\|	5.00E-16	archaeal thermosome [Candidatus Nitrososphaera gargensis Ga9.2]
KOG	KOG0230	0	Phosphatidylinositol-4-phosphate 5-kinase and related FYVE finger-containing proteins
nr	gi\|743823687\|ref\|XP_010932595.1\|	0	PREDICTED: putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C isoform X1 [Elaeis guineensis]
Swissprot	tr\|Q9LUM0\|FAB1B_ARATH	0	1-phosphatidylinositol-3-phosphate 5-kinase FAB1B
trEMBL	tr\|W9S0D4\|W9S0D4_9ROSA	0	1-phosphatidylinositol-3-phosphate 5-kinase {ECO:0000313\|EMBL:EXC06051.1}
TAIR	AT3G14270	0	phosphatidylinositol-4-phosphate 5-kinase family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000069	1564056	1582558	+

Transcript Sequence
>GWHTAAEX015849 CGTCTCCAACAGGTCATATTCCGTATTTGGTGCTCTAGTTTTGGCTGCACCGCCTTTTTCTCTCTTTGCTTCACCTCCATTTTCACTGCTCTTTCTTCTGCTAAATGATGACTGCGATGGCCACGAAAACTAATTAGATGTATAATCCGAAAGCTTGCACAGTTCATTACATCCATTAAAGTCTCCCAGAGTCTCTTTCTTTTCGCATCTCTTTCTTCCTCTGCCCACTTTATCCGCTCTCTCATTTTCTAATTTAACTAAAGCTCTGCAAAGACATGGAATCCACTTATTCTTCTCTCGCTCATACTTCTCAAGAAACGGGAACATGGTTCTCTTTTTCCCACTCATACTGACACACATCTAGTTACCCATGTCTCTTGCACCTCAGTTTCCCTTCTATCTTTCCAACTGTTTCGCCTTATGGTCTGGGAACAGTCGGGGATCGGTTGAGCTGCCTTGATTCGTCTTCTTTGTGTTTTAAAATATGCAAAATATAGATATTGATAAACAGGTTTGTTCGATATATTCTGATTGTATATAGACTCCACTCTCTCGAGATATTTTGGCTTCTCAAGAGGGTTATCCACTTTTTTTCTGGAGTTCATCAGCAAATTTTACTTGGTCACCTTCCTATTTTTTTTACCTTGGAGGACACCGAGGGTTTGCTCAATTTACTGATTAGTAAAGTTTGGGCCGAAAACCCCTCAAGTTTTTCAGTTTGTGTTTGGTATAGATCTCTTCGTTTTTAGTTGAAGAGAGTTTTGTACAGTGGGAGAAACTGCTGGGCTCGTTTTATGATCGGGGGCAGTTCCTCCTGCTGATGGGATTGGTGCTCCGCCCATTGCTTGATCTCTTTGTGAAAGTGGGTACTTGGATTTCGGAGCCTTCAGGTCCAGTTTCAAATTCTTTGATGTTGAACTTGGGTGAACGAGTTGCTTGCCATGAGTGCCGCCTGCTTCAGGCCAGCGGCCGGTGTCACAGTTGTGACCGTTTGTTCTCAGAGATTCACGAATGTGGGGAGACATTGCAGCTCCATGATTCCCTAAGCAAGTCTTCAGCCTCACCGCCAACAGAATTCAGTAATGATAGGCTTTTGGACCAGTCTGAATTGCAGCAGTTTTCTACTCACCTTAGATGCTCCACTTATAGGAGTGATGAGGATGAGGATGGATATGACAGCGGAAAGCATATTGCTAGCCCCGCCAGTGAGTTCTCTCAGGATGTCTCCGATGTGGAATCCATTAGTCTTAGTTGTAGCCAAGAGTTGTATAGCTTCAAGTCTCTGAATTCGAGCCCTTGGGATAGTCCTAACAAACTTGCTGATAACAGTGATAGCCCTGGGTCTAAAATTTCAATTTCATATCAAGAAGAGCAGGGTTACTCAAGGAAACCCGGGGCTGAGGCTGATGATAGTTATTTTGTGTATGACAACCTTTCACCTTACAAAAGTGATGTGAACCAGAAGGCTCAACAATCACTGGATTTTGAAAATAACATGCACATTTGGTATCCTCCACCTCCTGAGGATGAGAATGATGATATGGAAAATGGATATTTTGAGTATAATGATGAGGATGATGAACTTGAAGGCTTAGGCATGGATTTCCCATCAAATAGATTTGCAGGAGATGCTTTTCCCATCAGAGACAAGTCCAATGATCCGCACAAAGATTATCTAGGAAATGCTGTACGCAGGCATTTCACAGCGCTTGTGTCTCAGTTGCTTAAAGATGAAAAGATTCATGCTGACAATGAGAGTGGTATCGAGTGCTGGTTGGAGATTGTTTCTTCGTTGGCATGGCAGGCTGCAAAATTTGTTAAACCAGACACTAGAAAGGGAGGAAGCATGGATCCTAGTCATTATGTGAAGGTGAAGTGTGTAACATCCGGAACTCCCTCTGATAGCACTCTTATTAAGGGAATAGTTTGTACTAAAAATGTGAAGCACAAACGCATGGTTTCACAGCACAAAAATCCAAGAGTTTTACTTTTAGGAGGAGCACTGGAATACCAAAGAATCTCTAATAAGTTGGCATCGTTAAATACTGTAATGGAAGAGGAAAGCGATCACCTGAAGATTGCAGTCGCCAAGATTGAGGTTCATAGACCTAATGTTCTTCTAGTAGAAAAAAGTGTATCATCTTATGCACAAGAGTATCTTTTTGCCAAGGAAATATCGTTAGTGTTGAATGTTAAGAGATCTATAATGGAGAGAATATCTCGTTGCACTGGTGCTCAGCTAGTTCCATCAATTGATTGCATTGCATCAGCGCAAATGGGACAATGTGAGGTATTCCGCATCGAGAGAGTTGTCGAAGAATGTTCAGTAGGTATCCATCCCAGCAAACGATCTATGAAGACATTGATGTATTTTGAAGGATGTCCTAGGCGTTTGGGTTGTACGGTTATTTTGAAAGGCGCTTGTCTGGAGGAACTTAAGAAGGTTAAACATGTTGTTTCATTGGCAAGCTTTGCAGCCTATCATTTGTCACTTGAGACCTCATTTCTTGCTGATGAAGGCGCCACACTGCCTAAACTTCCCATGAAGGATCCGAGCTTTATTCAAGAGAATTTAATGAATGCTGATGTTGCAATGACTAAAGCTTTTTTGTCCAGTGAGGCTGGCATAAGGCTGCTAACTGCAGAGAAACATAAAAAACTTGCTGTAAATAGCAGTCGTGGAGTGCAGAGACCATTCGGGTTCTCAGATGCTTCATATGCAAATACAGGGATCCTCAGAAACACTACTAAGCAAATTGACCATAGTTCTTCTCTAAGCCATAATCTCTCTGGTAATATTTTTAGTTTATACTCAAGTAACTCTTTGGTTGAGATCGAAAACTCTCAATGTGGAAGCTTATGGAATGAACCTAGTACTATTAATCCAATAAATACCAGAATCTGGTTAAGAGATGATAAACTAGTACAAAATTTATGGGGTAAATGTAAGAACTTTGAATCTGCTGAGGAACATATCATCAGTATAAATGATAGCTTTGAGGTTCCTGAAGAGTACTTCTCTGCTACTGATAGCCAAAGCATCTTAGTTTCTTTGTCAAGTACTTGCATTCCTAAGGGAACTGTGTGCGAACGCTCTCAACTTTTTCGTATAAAGTTCTACGGTAGTTTTGATAAACCATTAGGAAGGTATCTCCGCGAAGACTTGTTTGATCAGTCTTCCAACTGCAGATCTTGCAATGAACCAGCTGAAGCTCATATTCGTTGTTATACTCACCAGCAAGGCAATCTTACAATAAGTGTGAAGTCACTAACTTTAATGAAGTTACCTGGTGAACGAGAGGGAAGGATATGGATGTGGCATAGGTGTCTTGTCTGTGAACCTGAAGATGGAATCCCCCCTGCCACGCATAGGGTAGTCCTGTCTGATGCGGCTTGGGGGCTATCTTTTGGGAAATTCTTGGAGCTTAGCTTTTCAAATCGGGCAACTGCTAATCGTTTGGCATGTTGTGGTCATTCTTTGCAGAAAGATTGCATTCGCTTTTATGGGTTTGGGAACATGGTTGCTTTCTTCCGCTATTCACCTGTAGACATGCTTTCTGTACACTTGCCTCCTTTGGTGCTTGATTTTGCATGTAATGGATTGCAAGAATGGATGAGACGTGAGGCAAATGTGATCCTTTCAAGTTTGAATTCCCTGCAATTGGAGGTTTCTTGTGTTCTTGAGAAAATTGACCTGAAGGTTACAGAATGTGATAGTGAGCCCATAAAAGCAATAATACACAAGCATATTTTAGAGCTAAAAGATGTTCTTCTAAGAGAGAAATTGGAGTATGATGTCTTGCTCAGACCATCGGCTGTGGAGAATGATCAAATTGCACATGGGATTCTTGACATTTTAGAACTAAATCGGTTGAAACACAGGCTTCTAATTAATTCTATTATGTGGGATCGCCGACTTTGTCTTCTAGATTCTCTTTCCAAATCAAAAGGTTCTAATACAGAAGTACATCCACAAACTCCGAAAGAATTTATTCATGTTAGCAAGGCAGAACTTGGGTCTAAACTTATTTTTAAAGAGGGACTGGACAGTTCTTTAGTGGAATCCAATGCTCGGCCACTCACCTTCTCAGAAAATTGGACTAAAAACCAACATGAAGAGTGCAACTTGCAAGTTCTGGAATGCAGTGCAAGTAACTTTGCAGACATGGACGTGCCAGTTGAGACTGTTGAGGGCTGCTACATTGGTGCTGCAGGTGTCAATTTGGTTTCTGGTCAAAGTTTTAGACGGGATGTAGAACAAATAGGCTATGATGGGAGTGATACTAATTTGTCAGATAAAATTGATCTAGTGTGGACTGGTTTGAGCCCATCATTTACTGATCAGCTTCCTAATAATACAGAAGCCGACTTACTTGGGAAACGTAGTTCGATCAATAATCCACGATTTAAGAATTTGAAATCTCCAGTCCGGACCAATTCTTTTGATTCTATTTTAAGTTTGCGGAAAAATCTCCATCGAAGATTATCACCACTTTCTACAAATTTCTCTTCTGTCAAATCATTTGACTCCTCCGGGGGTTCTGGTAGCACGGTTTCAAGCCCAAGAACTCGTCAAACTGTTGTTCAAAAAATCCCTTCATCTTTCAAGAAATTGAATGTCCTTTCCAGCCATATACCAGTCTTTATCTCATCGGTTTCTTGTATAGTTGATGAAGGAGCTCGATTATTAATACCTCATGGAGGTCAAGCTGATGTGGTAATTGCACTTTATGACAATGAACCGACAAGCATCATAACCTATGCTATTAATTCGCATGAGCATACAAATTTTATAAGCTGCAAGCCTTTCCGATATGAAATAAAGTCGGAGGAAGACAAGCTAAATTCTGGATTAGCAAGACTTTCATTTTCTCAATATGAGGCTGATGATACCCAGCCTTGGAACAATGGTTTTGATGAATCAAAGTCGTTTCAAGGGAGCATAATTACAGATCACAAAGATCCTCATTTCAAGTTTTTTTTTGACGATGACTATTCAATTAAAGGTGATAATGTAAAATTCTCTGTTACATGTTATTTTGCAAAACCATTTGACGCTCTAAGGAAGAAATGCTGCCCAAATGATATGGATTTTATCCGTTCACTCAGCCGCTGCAAGAAATGGAATGCCCAAGGTGGCAAAAGTAATGCATATTTTGCCAAGTCACTGGATGAGAGATTCATCATTAAACAGGTAACAAAAACAGAGTTGGATTCTTTTGAAGACTTTGCTCCGGAGTACTTTAACTATTTGACGGAGTCAATATCTTCTGGAAGTCCCACATGTCTTGCAAAAGTCTTTGGTATTTACCAGGTAATTGTTAAGCACTTGAAAGGAGGAAGAGAAGTGAAGATGGACTTAATGGTGATGGAAAACTTACTTTATGGAAAGAATTTTTCTAGAGTTTATGACCTTAAGGGTTCATTGCGGGCCCGTTACAATCCTGATACTTCTGGAACTAACAAAGTTTTGTTGGATTTGAATCTGCTGGAGACATTACGCACAAAGCCAATTTTTCTCAGCAGCAAGGCTAAAAGAAAGTTGGAAAGAGCAATTTGGAATGATACGGCATTACTTGGGTCCATAGACGTCATGGATTACTCATTGCTGGTTGGCGTTGACGAGGGAGAAAATGATCTCGTGATCGGTATCATAGACTACATGAGGCAATATACTTGGGATAAGCACCTGGAAACGTGGGTCAAGGCTTCAGGAATTCTCGGCGGCTCCAAAAATGCTTCTCCAACTGTAATATCCCCACTGCAGTACAAGAAAAGGTTCAGAAAAGCCATGTCAAAGTATTTCCTCACTGTCCCCGATCATTGATCTTCTTCATGATCCCTCAGCAGCACAGAAGAGATTATGGCTGGTAAACATTATGAAGAGAGAAGGCTGAAATTTTCATTCTCATGTCTACTCTTTTCTAGTTTTTCTTCTGTGTATCGGCTGCATTCAACCTGTTGACTAACTGTATATTGTGTATTCTAGCTGCTCAATTGTTCGATGAAAGCGTTATTCTAGTTCATGAAAAATGATCTTTGCATTCATCAAACTTAAGTTTACTTTATTTCTTATGATAAAGGCCAAATTAGAAGTGATGATTGTTTAAAAAATGAGCCGTTAGACCTTT

Network for GWHGAAEX015849

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00118.23	Cpn60_TCP1	318	554	3.60E-29
PF01504.17	PIP5K	1438	1603	9.60E-32
PF01504.17	PIP5K	1607	1661	2.10E-06

Protein Sequence

>GWHPAAEX015849
MGLVLRPLLDLFVKVGTWISEPSGPVSNSLMLNLGERVACHECRLLQASGRCHSCDRLFSEIHECGETLQLHDSLSKSSASPPTEFSNDRLLDQSELQQFSTHLRCSTYRSDEDEDGYDSGKHIASPASEFSQDVSDVESISLSCSQELYSFKSLNSSPWDSPNKLADNSDSPGSKISISYQEEQGYSRKPGAEADDSYFVYDNLSPYKSDVNQKAQQSLDFENNMHIWYPPPPEDENDDMENGYFEYNDEDDELEGLGMDFPSNRFAGDAFPIRDKSNDPHKDYLGNAVRRHFTALVSQLLKDEKIHADNESGIECWLEIVSSLAWQAAKFVKPDTRKGGSMDPSHYVKVKCVTSGTPSDSTLIKGIVCTKNVKHKRMVSQHKNPRVLLLGGALEYQRISNKLASLNTVMEEESDHLKIAVAKIEVHRPNVLLVEKSVSSYAQEYLFAKEISLVLNVKRSIMERISRCTGAQLVPSIDCIASAQMGQCEVFRIERVVEECSVGIHPSKRSMKTLMYFEGCPRRLGCTVILKGACLEELKKVKHVVSLASFAAYHLSLETSFLADEGATLPKLPMKDPSFIQENLMNADVAMTKAFLSSEAGIRLLTAEKHKKLAVNSSRGVQRPFGFSDASYANTGILRNTTKQIDHSSSLSHNLSGNIFSLYSSNSLVEIENSQCGSLWNEPSTINPINTRIWLRDDKLVQNLWGKCKNFESAEEHIISINDSFEVPEEYFSATDSQSILVSLSSTCIPKGTVCERSQLFRIKFYGSFDKPLGRYLREDLFDQSSNCRSCNEPAEAHIRCYTHQQGNLTISVKSLTLMKLPGEREGRIWMWHRCLVCEPEDGIPPATHRVVLSDAAWGLSFGKFLELSFSNRATANRLACCGHSLQKDCIRFYGFGNMVAFFRYSPVDMLSVHLPPLVLDFACNGLQEWMRREANVILSSLNSLQLEVSCVLEKIDLKVTECDSEPIKAIIHKHILELKDVLLREKLEYDVLLRPSAVENDQIAHGILDILELNRLKHRLLINSIMWDRRLCLLDSLSKSKGSNTEVHPQTPKEFIHVSKAELGSKLIFKEGLDSSLVESNARPLTFSENWTKNQHEECNLQVLECSASNFADMDVPVETVEGCYIGAAGVNLVSGQSFRRDVEQIGYDGSDTNLSDKIDLVWTGLSPSFTDQLPNNTEADLLGKRSSINNPRFKNLKSPVRTNSFDSILSLRKNLHRRLSPLSTNFSSVKSFDSSGGSGSTVSSPRTRQTVVQKIPSSFKKLNVLSSHIPVFISSVSCIVDEGARLLIPHGGQADVVIALYDNEPTSIITYAINSHEHTNFISCKPFRYEIKSEEDKLNSGLARLSFSQYEADDTQPWNNGFDESKSFQGSIITDHKDPHFKFFFDDDYSIKGDNVKFSVTCYFAKPFDALRKKCCPNDMDFIRSLSRCKKWNAQGGKSNAYFAKSLDERFIIKQVTKTELDSFEDFAPEYFNYLTESISSGSPTCLAKVFGIYQVIVKHLKGGREVKMDLMVMENLLYGKNFSRVYDLKGSLRARYNPDTSGTNKVLLDLNLLETLRTKPIFLSSKAKRKLERAIWNDTALLGSIDVMDYSLLVGVDEGENDLVIGIIDYMRQYTWDKHLETWVKASGILGGSKNASPTVISPLQYKKRFRKAMSKYFLTVPDH

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K00921	PIKFYVE, FAB1	Metabolic pathways	map01100
		Inositol phosphate metabolism	map00562
		Phosphatidylinositol signaling system	map04070
		Phagosome	map04145
		Regulation of actin cytoskeleton	map04810

Gene Ontology

GO term	Ontology	Name
GO:0046488	Biological Process	phosphatidylinositol metabolic process
GO:0016307	Molecular Function	phosphatidylinositol phosphate kinase activity
GO:0005524	Molecular Function	ATP binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	18.760
SRP064423	SRR2545915	Juvenile tuber	25.870
SRP108465	SRR5643513	five period of Gastrodia elata	18.400
	SRR5643514	five period of Gastrodia elata	23.720
	SRR5643515	five period of Gastrodia elata	20.440
	SRR5643524	five period of Gastrodia elata	22.010
	SRR5643525	five period of Gastrodia elata	32.970
	SRR5643528	five period of Gastrodia elata	24.770
	SRR5643658	five period of Gastrodia elata	33.650
	SRR5643659	five period of Gastrodia elata	14.710
	SRR5643660	five period of Gastrodia elata	15.360
	SRR5643661	five period of Gastrodia elata	13.760
	SRR5643662	five period of Gastrodia elata	17.170
	SRR5643663	five period of Gastrodia elata	18.940
	SRR5643664	five period of Gastrodia elata	14.540
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	19.650
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	17.720
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	21.690
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	15.340
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	17.720
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	18.240
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	15.700
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	16.850
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	22.540
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	20.790
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	21.790
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	21.790
SRP279888	Gastro	Gastrodia elata tuber	12.42
	Juven	Juvenile tuber	13.85
	Mother_Gastro	Mother tuber of Gastrodia elata	12.77
	Mother_Juven	Mother tuber of Juvenile	13.30