Detail information of GWHGAAEX015850/evm.TU.scaffold_70.30


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743881471|ref|XP_010908911.1|3.42E-57PREDICTED: protein TIFY 6B-like [Elaeis guineensis]
Swissprottr|Q8W4J8|TIF7_ARATH1.00E-18Protein TIFY 7
trEMBLtr|M0TGZ1|M0TGZ1_MUSAM2.00E-39Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P12530_001}
TAIRAT1G707003.00E-18TIFY domain/Divergent CCT motif family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006916225691632398-
Transcript Sequence

Network for GWHGAAEX015850

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06200.13tify1762062.10E-14
PF09425.9CCT_22983228.30E-12
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyTify

KEGG pathway

KO Enzyme pathway mapID
K13464JAZ Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms80.340
SRR2545915Juvenile tuber62.730
SRP108465SRR5643513five period of Gastrodia elata54.730
SRR5643514five period of Gastrodia elata49.770
SRR5643515five period of Gastrodia elata51.070
SRR5643524five period of Gastrodia elata43.550
SRR5643525five period of Gastrodia elata13.490
SRR5643528five period of Gastrodia elata13.950
SRR5643658five period of Gastrodia elata12.220
SRR5643659five period of Gastrodia elata41.580
SRR5643660five period of Gastrodia elata37.940
SRR5643661five period of Gastrodia elata39.820
SRR5643662five period of Gastrodia elata31.490
SRR5643663five period of Gastrodia elata35.870
SRR5643664five period of Gastrodia elata36.060
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_185.910
SRR6049655Rhizomagastrodiae_C368-T10_good_171.500
SRR6049656Rhizomagastrodiae_C368-T07_good_163.370
SRR6049657Rhizomagastrodiae_C368-T07_good_170.670
SRR6049658Rhizomagastrodiae_C368-T04_good_169.880
SRR6049659Rhizomagastrodiae_C368-T04_good_176.460
SRR6049660Rhizomagastrodiae_C368-T01_good_162.730
SRR6049661Rhizomagastrodiae_C368-T04_good_162.880
SRR6049662Rhizomagastrodiae_C368-T01_good_170.880
SRR6049663Rhizomagastrodiae_C368-T01_good_166.840
SRR6049664Rhizomagastrodiae_C368-T10_good_173.140
SRR6049665Rhizomagastrodiae_C368-T10_good_173.140
SRP279888GastroGastrodia elata tuber 48.52
JuvenJuvenile tuber79.87
Mother_GastroMother tuber of Gastrodia elata 19.24
Mother_JuvenMother tuber of Juvenile 48.64