Detail information of GWHGAAEX015862/evm.TU.scaffold_70.43


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|15599828|ref|NP_253322.1|2.00E-13hypothetical protein PA4632 [Pseudomonas aeruginosa PAO1]
KOGKOG26616.00E-81Peptidase family M48
nrgi|743774294|ref|XP_010917499.1|2.71E-116PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105042099 [Elaeis guineensis]
trEMBLtr|M0T3J3|M0T3J3_MUSAM1.00E-112Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P02450_001}
TAIRAT5G517406.00E-81Peptidase family M48 family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006921312122132150-
Transcript Sequence

Network for GWHGAAEX015862

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01435.17Peptidase_M482583041.20E-09
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0006508Biological Processproteolysis
GO:0004222Molecular Functionmetalloendopeptidase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms22.540
SRR2545915Juvenile tuber27.650
SRP108465SRR5643513five period of Gastrodia elata39.580
SRR5643514five period of Gastrodia elata46.830
SRR5643515five period of Gastrodia elata39.780
SRR5643524five period of Gastrodia elata44.250
SRR5643525five period of Gastrodia elata61.290
SRR5643528five period of Gastrodia elata43.990
SRR5643658five period of Gastrodia elata57.420
SRR5643659five period of Gastrodia elata43.630
SRR5643660five period of Gastrodia elata57.600
SRR5643661five period of Gastrodia elata52.780
SRR5643662five period of Gastrodia elata48.640
SRR5643663five period of Gastrodia elata49.510
SRR5643664five period of Gastrodia elata56.710
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_141.830
SRR6049655Rhizomagastrodiae_C368-T10_good_140.700
SRR6049656Rhizomagastrodiae_C368-T07_good_139.870
SRR6049657Rhizomagastrodiae_C368-T07_good_139.180
SRR6049658Rhizomagastrodiae_C368-T04_good_139.680
SRR6049659Rhizomagastrodiae_C368-T04_good_137.300
SRR6049660Rhizomagastrodiae_C368-T01_good_140.860
SRR6049661Rhizomagastrodiae_C368-T04_good_142.050
SRR6049662Rhizomagastrodiae_C368-T01_good_142.110
SRR6049663Rhizomagastrodiae_C368-T01_good_134.970
SRR6049664Rhizomagastrodiae_C368-T10_good_150.200
SRR6049665Rhizomagastrodiae_C368-T10_good_150.200
SRP279888GastroGastrodia elata tuber 47.40
JuvenJuvenile tuber59.15
Mother_GastroMother tuber of Gastrodia elata 56.42
Mother_JuvenMother tuber of Juvenile 60.89