Detail information of GWHGAAEX015893/evm.TU.scaffold_70.80


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|170290521|ref|YP_001737337.1|2.00E-34small GTP-binding protein [Candidatus Korarchaeum cryptofilum OPF8]
KOGKOG00702.00E-115GTP-binding ADP-ribosylation factor Arf1
nrgi|225432850|ref|XP_002283837.1|9.06E-118PREDICTED: ADP-ribosylation factor-like protein 5 [Vitis vinifera]
Swissprottr|P51824|ARF1_SOLTU2.00E-70ADP-ribosylation factor 1
trEMBLtr|W9S5U2|W9S5U2_9ROSA2.00E-116ADP-ribosylation factor-like protein 5 {ECO:0000313|EMBL:EXC16772.1}
TAIRAT3G229502.00E-115ADP-ribosylation factor C1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006934403053463441+
Transcript Sequence

Network for GWHGAAEX015893

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00025.20Arf141768.80E-65
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005525Molecular FunctionGTP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms41.370
SRR2545915Juvenile tuber34.220
SRP108465SRR5643513five period of Gastrodia elata69.960
SRR5643514five period of Gastrodia elata69.800
SRR5643515five period of Gastrodia elata79.630
SRR5643524five period of Gastrodia elata69.160
SRR5643525five period of Gastrodia elata104.030
SRR5643528five period of Gastrodia elata106.940
SRR5643658five period of Gastrodia elata90.970
SRR5643659five period of Gastrodia elata74.130
SRR5643660five period of Gastrodia elata81.110
SRR5643661five period of Gastrodia elata89.700
SRR5643662five period of Gastrodia elata80.620
SRR5643663five period of Gastrodia elata69.340
SRR5643664five period of Gastrodia elata84.870
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_155.050
SRR6049655Rhizomagastrodiae_C368-T10_good_154.220
SRR6049656Rhizomagastrodiae_C368-T07_good_152.570
SRR6049657Rhizomagastrodiae_C368-T07_good_144.130
SRR6049658Rhizomagastrodiae_C368-T04_good_148.310
SRR6049659Rhizomagastrodiae_C368-T04_good_154.200
SRR6049660Rhizomagastrodiae_C368-T01_good_153.190
SRR6049661Rhizomagastrodiae_C368-T04_good_152.230
SRR6049662Rhizomagastrodiae_C368-T01_good_159.820
SRR6049663Rhizomagastrodiae_C368-T01_good_153.960
SRR6049664Rhizomagastrodiae_C368-T10_good_160.600
SRR6049665Rhizomagastrodiae_C368-T10_good_160.600
SRP279888GastroGastrodia elata tuber 68.17
JuvenJuvenile tuber53.89
Mother_GastroMother tuber of Gastrodia elata 96.06
Mother_JuvenMother tuber of Juvenile 96.86