Detail information of GWHGAAEX015895/evm.TU.scaffold_70.82


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|186683200|ref|YP_001866396.1|1.00E-26signal transduction protein [Nostoc punctiforme PCC 73102]
KOGKOG00275.00E-63Calmodulin and related proteins (EF-Hand superfamily)
nrgi|672175901|ref|XP_008808019.1|3.82E-72PREDICTED: calmodulin-like [Phoenix dactylifera]
Swissprottr|O82018|CALM_MOUSC1.00E-64Calmodulin
trEMBLtr|M0TDS9|M0TDS9_MUSAM8.00E-68Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P01390_001}
TAIRAT4G146405.00E-63calmodulin 8

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006934787973480158-
Transcript Sequence

Network for GWHGAAEX015895

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13499.5EF-hand_713724.90E-12
PF13499.5EF-hand_7821459.20E-17
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13448CML Plant-pathogen interaction map04626

Gene Ontology

GO term OntologyName
GO:0005509Molecular Functioncalcium ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.470
SRR2545915Juvenile tuber0.000
SRP108465SRR5643513five period of Gastrodia elata0.270
SRR5643514five period of Gastrodia elata0.620
SRR5643515five period of Gastrodia elata0.250
SRR5643524five period of Gastrodia elata0.880
SRR5643525five period of Gastrodia elata0.000
SRR5643528five period of Gastrodia elata0.280
SRR5643658five period of Gastrodia elata0.000
SRR5643659five period of Gastrodia elata0.220
SRR5643660five period of Gastrodia elata0.970
SRR5643661five period of Gastrodia elata0.240
SRR5643662five period of Gastrodia elata0.250
SRR5643663five period of Gastrodia elata0.190
SRR5643664five period of Gastrodia elata0.680
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.870
SRR6049655Rhizomagastrodiae_C368-T10_good_11.000
SRR6049656Rhizomagastrodiae_C368-T07_good_12.940
SRR6049657Rhizomagastrodiae_C368-T07_good_10.220
SRR6049658Rhizomagastrodiae_C368-T04_good_10.540
SRR6049659Rhizomagastrodiae_C368-T04_good_10.630
SRR6049660Rhizomagastrodiae_C368-T01_good_12.620
SRR6049661Rhizomagastrodiae_C368-T04_good_14.090
SRR6049662Rhizomagastrodiae_C368-T01_good_13.080
SRR6049663Rhizomagastrodiae_C368-T01_good_111.240
SRR6049664Rhizomagastrodiae_C368-T10_good_13.820
SRR6049665Rhizomagastrodiae_C368-T10_good_13.820
SRP279888GastroGastrodia elata tuber 0.21
JuvenJuvenile tuber0.27
Mother_GastroMother tuber of Gastrodia elata 0.58
Mother_JuvenMother tuber of Juvenile 0.65