Detail information of GWHGAAEX015897/evm.TU.scaffold_70.84
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|328951339|ref|YP_004368674.1| | 1.00E-52 | Sulfate adenylyltransferase [Marinithermus hydrothermalis DSM 14884] |
| KOG | KOG0636 | 0 | ATP sulfurylase (sulfate adenylyltransferase) |
| nr | gi|694998019|ref|XP_009402381.1| | 0 | PREDICTED: ATP sulfurylase 1, chloroplastic-like [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|Q9LIK9|APS1_ARATH | 0 | ATP sulfurylase 1, chloroplastic (Precursor) |
| trEMBL | tr|M0RZR6|M0RZR6_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P14080_001} |
| TAIR | AT3G22890 | 0 | ATP sulfurylase 1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000069 | 3623184 | 3631268 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX015897
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF14306.5 | PUA_2 | 41 | 207 | 2.80E-40 |
| PF01747.16 | ATP-sulfurylase | 216 | 439 | 2.90E-67 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0000103 | Biological Process | sulfate assimilation |
| GO:0004781 | Molecular Function | sulfate adenylyltransferase (ATP) activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 16.990 |
| SRR2545915 | Juvenile tuber | 15.760 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 30.180 |
| SRR5643514 | five period of Gastrodia elata | 16.420 | |
| SRR5643515 | five period of Gastrodia elata | 42.260 | |
| SRR5643524 | five period of Gastrodia elata | 33.740 | |
| SRR5643525 | five period of Gastrodia elata | 25.190 | |
| SRR5643528 | five period of Gastrodia elata | 185.040 | |
| SRR5643658 | five period of Gastrodia elata | 35.530 | |
| SRR5643659 | five period of Gastrodia elata | 29.870 | |
| SRR5643660 | five period of Gastrodia elata | 61.180 | |
| SRR5643661 | five period of Gastrodia elata | 29.930 | |
| SRR5643662 | five period of Gastrodia elata | 96.730 | |
| SRR5643663 | five period of Gastrodia elata | 26.530 | |
| SRR5643664 | five period of Gastrodia elata | 31.510 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 25.620 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 13.260 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 25.440 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 31.060 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 25.500 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 26.790 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 49.910 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 28.040 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 21.230 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 26.680 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 17.070 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 17.070 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 26.83 |
| Juven | Juvenile tuber | 20.44 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 111.41 | |
| Mother_Juven | Mother tuber of Juvenile | 78.19 |