Detail information of GWHGAAEX015904/evm.TU.scaffold_70.95


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG32329.00E-126Vacuolar assembly/sorting protein DID2
nrgi|695081563|ref|XP_009388308.1|1.24E-137PREDICTED: charged multivesicular body protein 1-like [Musa acuminata subsp. malaccensis]
trEMBLtr|A0A068TNW6|A0A068TNW6_COFCA6.00E-132Coffea canephora
TAIRAT1G177309.00E-126vacuolar protein sorting 46.1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006946911134692489-
Transcript Sequence

Network for GWHGAAEX015904

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03357.20Snf7111732.20E-12
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K12197CHMP1, VPS46, DID2 Endocytosis map04144
Necroptosismap04217

Gene Ontology

GO term OntologyName
GO:0007034Biological Processvacuolar transport

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms43.950
SRR2545915Juvenile tuber59.550
SRP108465SRR5643513five period of Gastrodia elata76.590
SRR5643514five period of Gastrodia elata73.440
SRR5643515five period of Gastrodia elata74.450
SRR5643524five period of Gastrodia elata81.140
SRR5643525five period of Gastrodia elata150.980
SRR5643528five period of Gastrodia elata157.410
SRR5643658five period of Gastrodia elata119.220
SRR5643659five period of Gastrodia elata79.910
SRR5643660five period of Gastrodia elata83.700
SRR5643661five period of Gastrodia elata82.410
SRR5643662five period of Gastrodia elata106.170
SRR5643663five period of Gastrodia elata70.720
SRR5643664five period of Gastrodia elata71.450
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_175.920
SRR6049655Rhizomagastrodiae_C368-T10_good_184.320
SRR6049656Rhizomagastrodiae_C368-T07_good_198.650
SRR6049657Rhizomagastrodiae_C368-T07_good_176.400
SRR6049658Rhizomagastrodiae_C368-T04_good_184.410
SRR6049659Rhizomagastrodiae_C368-T04_good_183.950
SRR6049660Rhizomagastrodiae_C368-T01_good_171.620
SRR6049661Rhizomagastrodiae_C368-T04_good_1104.880
SRR6049662Rhizomagastrodiae_C368-T01_good_1104.500
SRR6049663Rhizomagastrodiae_C368-T01_good_189.040
SRR6049664Rhizomagastrodiae_C368-T10_good_1105.700
SRR6049665Rhizomagastrodiae_C368-T10_good_1105.700
SRP279888GastroGastrodia elata tuber 113.34
JuvenJuvenile tuber68.97
Mother_GastroMother tuber of Gastrodia elata 327.52
Mother_JuvenMother tuber of Juvenile 171.52