Detail information of GWHGAAEX015906/evm.TU.scaffold_70.97


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG08354.00E-135Cyclin L
nrgi|672184792|ref|XP_008812657.1|0PREDICTED: cyclin-L1-1 isoform X2 [Phoenix dactylifera]
Swissprottr|Q9AS36|CCL11_ORYSJ0Cyclin-L1-1
trEMBLtr|M0TN86|M0TN86_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P06830_001}
TAIRAT2G264304.00E-135arginine-rich cyclin 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006946957644709899-
Transcript Sequence

Network for GWHGAAEX015906

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00134.22Cyclin_N91477.70E-15
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms82.080
SRR2545915Juvenile tuber84.180
SRP108465SRR5643513five period of Gastrodia elata50.490
SRR5643514five period of Gastrodia elata45.420
SRR5643515five period of Gastrodia elata51.400
SRR5643524five period of Gastrodia elata46.530
SRR5643525five period of Gastrodia elata72.310
SRR5643528five period of Gastrodia elata65.700
SRR5643658five period of Gastrodia elata70.470
SRR5643659five period of Gastrodia elata45.380
SRR5643660five period of Gastrodia elata48.870
SRR5643661five period of Gastrodia elata42.320
SRR5643662five period of Gastrodia elata52.930
SRR5643663five period of Gastrodia elata51.410
SRR5643664five period of Gastrodia elata53.070
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_151.860
SRR6049655Rhizomagastrodiae_C368-T10_good_148.190
SRR6049656Rhizomagastrodiae_C368-T07_good_155.550
SRR6049657Rhizomagastrodiae_C368-T07_good_164.460
SRR6049658Rhizomagastrodiae_C368-T04_good_179.930
SRR6049659Rhizomagastrodiae_C368-T04_good_186.090
SRR6049660Rhizomagastrodiae_C368-T01_good_163.520
SRR6049661Rhizomagastrodiae_C368-T04_good_175.400
SRR6049662Rhizomagastrodiae_C368-T01_good_146.580
SRR6049663Rhizomagastrodiae_C368-T01_good_158.730
SRR6049664Rhizomagastrodiae_C368-T10_good_146.880
SRR6049665Rhizomagastrodiae_C368-T10_good_146.880
SRP279888GastroGastrodia elata tuber 106.09
JuvenJuvenile tuber78.21
Mother_GastroMother tuber of Gastrodia elata 308.25
Mother_JuvenMother tuber of Juvenile 218.70