Detail information of GWHGAAEX015908/evm.TU.scaffold_70.99
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| nr | gi|743768213|ref|XP_010914386.1| | 2.42E-133 | PREDICTED: peroxidase 3-like [Elaeis guineensis] |
| Swissprot | tr|Q67Z07|PER2_ARATH | 2.00E-103 | Peroxidase 2 (Precursor) |
| trEMBL | tr|A2I994|A2I994_9MAGN | 3.00E-132 | Putative peroxidase {ECO:0000313|EMBL:ABM66586.1} |
| TAIR | AT1G05250 | 6.00E-103 | Peroxidase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000069 | 4712319 | 4714512 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX015908
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00141.22 | peroxidase | 47 | 286 | 1.80E-70 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00430 | E1.11.1.7 | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Phenylpropanoid biosynthesis | map00940 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0042744 | Biological Process | hydrogen peroxide catabolic process |
| GO:0006979 | Biological Process | response to oxidative stress |
| GO:0004601 | Molecular Function | peroxidase activity |
| GO:0020037 | Molecular Function | heme binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 45.420 |
| SRR2545915 | Juvenile tuber | 60.540 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 97.150 |
| SRR5643514 | five period of Gastrodia elata | 179.210 | |
| SRR5643515 | five period of Gastrodia elata | 128.080 | |
| SRR5643524 | five period of Gastrodia elata | 196.220 | |
| SRR5643525 | five period of Gastrodia elata | 126.070 | |
| SRR5643528 | five period of Gastrodia elata | 139.390 | |
| SRR5643658 | five period of Gastrodia elata | 90.070 | |
| SRR5643659 | five period of Gastrodia elata | 14.430 | |
| SRR5643660 | five period of Gastrodia elata | 15.350 | |
| SRR5643661 | five period of Gastrodia elata | 12.390 | |
| SRR5643662 | five period of Gastrodia elata | 14.260 | |
| SRR5643663 | five period of Gastrodia elata | 10.630 | |
| SRR5643664 | five period of Gastrodia elata | 13.800 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 302.300 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 371.890 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 479.360 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 227.640 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 216.880 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 209.590 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 119.200 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 261.160 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 395.980 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 221.330 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 529.480 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 529.480 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 26.84 |
| Juven | Juvenile tuber | 20.33 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 1,638.54 | |
| Mother_Juven | Mother tuber of Juvenile | 642.72 |