Detail information of GWHGAAEX015909/evm.TU.scaffold_70.100
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| nr | gi|672184808|ref|XP_008812662.1| | 1.93E-151 | PREDICTED: peroxidase 3-like [Phoenix dactylifera] |
| Swissprot | tr|Q9ZV04|PER24_ARATH | 5.00E-105 | Peroxidase 24 (Precursor) |
| trEMBL | tr|A5HSH6|A5HSH6_9MAGN | 1.00E-139 | Putative peroxidase {ECO:0000313|EMBL:ABQ23446.1} |
| TAIR | AT2G39040 | 2.00E-104 | Peroxidase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000069 | 4723319 | 4726772 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX015909
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00141.22 | peroxidase | 45 | 290 | 5.90E-69 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00430 | E1.11.1.7 | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Phenylpropanoid biosynthesis | map00940 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006979 | Biological Process | response to oxidative stress |
| GO:0042744 | Biological Process | hydrogen peroxide catabolic process |
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0020037 | Molecular Function | heme binding |
| GO:0004601 | Molecular Function | peroxidase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 4.490 |
| SRR2545915 | Juvenile tuber | 205.720 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 168.260 |
| SRR5643514 | five period of Gastrodia elata | 101.340 | |
| SRR5643515 | five period of Gastrodia elata | 124.750 | |
| SRR5643524 | five period of Gastrodia elata | 98.390 | |
| SRR5643525 | five period of Gastrodia elata | 66.120 | |
| SRR5643528 | five period of Gastrodia elata | 2.230 | |
| SRR5643658 | five period of Gastrodia elata | 2.070 | |
| SRR5643659 | five period of Gastrodia elata | 3.050 | |
| SRR5643660 | five period of Gastrodia elata | 1.350 | |
| SRR5643661 | five period of Gastrodia elata | 1.150 | |
| SRR5643662 | five period of Gastrodia elata | 0.840 | |
| SRR5643663 | five period of Gastrodia elata | 1.680 | |
| SRR5643664 | five period of Gastrodia elata | 1.100 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 359.030 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 268.860 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 222.160 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 331.020 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 77.890 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 46.280 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 77.810 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 133.610 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 105.890 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 53.080 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 310.880 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 310.880 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 0.72 |
| Juven | Juvenile tuber | 36.64 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 1.44 | |
| Mother_Juven | Mother tuber of Juvenile | 3.49 |