Detail information of GWHGAAEX015914/evm.TU.scaffold_70.103
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|428224161|ref|YP_007108258.1| | 2.00E-38 | alpha/beta fold family hydrolase [Geitlerinema sp. PCC 7407] |
| nr | gi|743865168|ref|XP_010904773.1| | 0 | PREDICTED: acyltransferase-like protein At1g54570, chloroplastic [Elaeis guineensis] |
| Swissprot | tr|Q9ZVN2|Y1457_ARATH | 0 | Acyltransferase-like protein At1g54570, chloroplastic (Precursor) |
| trEMBL | tr|M0RVD4|M0RVD4_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P25540_001} |
| TAIR | AT1G54570 | 0 | Esterase/lipase/thioesterase family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000069 | 4774429 | 4820554 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX015914
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF12146.7 | Hydrolase_4 | 144 | 347 | 6.10E-10 |
| PF03982.12 | DAGAT | 480 | 555 | 3.90E-05 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0016747 | Molecular Function | transferase activity, transferring acyl groups other than amino-acyl groups |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 6.420 |
| SRR2545915 | Juvenile tuber | 5.740 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 4.050 |
| SRR5643514 | five period of Gastrodia elata | 3.520 | |
| SRR5643515 | five period of Gastrodia elata | 4.250 | |
| SRR5643524 | five period of Gastrodia elata | 2.780 | |
| SRR5643525 | five period of Gastrodia elata | 6.550 | |
| SRR5643528 | five period of Gastrodia elata | 8.780 | |
| SRR5643658 | five period of Gastrodia elata | 5.480 | |
| SRR5643659 | five period of Gastrodia elata | 3.730 | |
| SRR5643660 | five period of Gastrodia elata | 3.700 | |
| SRR5643661 | five period of Gastrodia elata | 3.280 | |
| SRR5643662 | five period of Gastrodia elata | 3.270 | |
| SRR5643663 | five period of Gastrodia elata | 5.020 | |
| SRR5643664 | five period of Gastrodia elata | 4.440 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 4.820 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 3.420 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 4.360 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 4.010 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 4.490 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 4.310 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 4.730 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 4.030 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 4.400 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 3.480 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 3.640 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 3.640 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 6.33 |
| Juven | Juvenile tuber | 5.45 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 5.72 | |
| Mother_Juven | Mother tuber of Juvenile | 6.91 |