Gene detail

Detail information of GWHGAAEX015920/evm.TU.scaffold_71.14

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG1339	9.00E-72	Aspartyl protease
nr	gi\|657370954\|gb\|KEH16988.1\|	1.64E-97	senescence-associated protein, putative [Medicago truncatula]
Swissprot	tr\|Q3EBM5\|ASPR1_ARATH	3.00E-71	Probable aspartic protease At2g35615 (Precursor)
trEMBL	tr\|I1LXQ4\|I1LXQ4_SOYBN	5.00E-102	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA13G11810.1}
TAIR	AT1G31450	9.00E-72	Eukaryotic aspartyl protease family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000074	168024	195169	+

Transcript Sequence
>GWHTAAEX015920 ATGGCTTCTTCATCTCTGCTTGCGGTTTCCTGCCTTATGATCATCCTAATCTCGCATCCCGTATACAGTTTGGACATTTCTTTGGAGATTATACACCGCAATTCAGAACACTCTCCTTTACGCGACACAGAGCCCAGCCTCATGGGAGCATACAAGCGCTCGTATGAGCGTGCCCGGTACCTCCAACAAGCCGCCATGAAAGGCACCACCACCTCTAATTCCGACAACCTACAGACCACCTTGATCCCCAGTTCCGGTGAGTATCTCATCAATCTAGGGGCACAATCTGACAAAAGTTTCCGTGCGATCGCCGACACCGGCAGCGATCTTATTTGGATGCAATGCGTGCCGTGCGAGGGGTGTTCCCAAGAGGCTGCCCCCCTGTTCAATCCCAAGAAATCCTCCTCCTACAAAGTCATCAAATATGGCTCCCAGAATTGTTTGAGCTTACCGCAGAAATCTATCGGCCCTGATTCCTCCTGCCAATACAGCTACGGCTATGGGGATGGTTCCGCTGTTCAAGGCACTCTCTCCAAAGACACCTTCATCGTAGACCAACAGCAGTTTCCCAACATCGTATTCGGGTGCACTCATAGTACCAAAGGAAACTTTGCTCAAAAAGGTCTGGGGCTCGTCGGGCTCGGGGGAGGCCCCCTCTCTCTTGTCCGCCAGATTGGCAAGAGCATCGACCACAAATTCTCCTACTGCCTCCCTTCCGAAGACCAGAAAGATGCCAAGGGCCATATCCACTTCGGGGCTGAATCATTCGTTGCATCTGACTCCAGTAATGTCGTCACCACTCCATTGATTCAAGGATCCCCCAGCACATTCTACTACCTCAATCTTGAGTCGATTCAAGTGGCTGATGATACAGAATTCGTAACCGTCGAATCCGCAACGCCTGCAGAAGCCAACCAAGCTAAGGGAAACATCATCATTGATTCTGGCACCACACTCACCTTCCTTGATGCCGCAACCCTGAAAGCCGTTGAAGACAAGCTCAAGGCCATGGTTCGAGATACCCAAGTCCAAGATCCCAATAATCTGTTCACCCTTTGCTTCCAGCTCACCCAAGAAAGTGCAGAATTGCCTACCATCGTATTCCGCTTCACCGACGCAAATGTTGTTTTGCCTCCGTCGAATACTTTTGTCCAATCCGCTCAGAATATAAAGTGCCTCAGCTTTGTATCCAGCAAGGGCATTGGACTCAACATCTTCGGCAATATTGCTCAGCACAACTTTCATATCGGCTACGATCTCAAAAATAAAAAGCTCTCTCTGGTTCCAAAAACATCGCTCGCCCGACGTGCCCCAGAGCGCACGCGTACCGCATCCCCAGCGAGCCCCTCCGGCCTCAGCCGCGCGGCACTCGCCCGACGTGTCCCTCCGGCCTCGGCCGCGCGGCGCTCGCCCGACGTGCCCCCGAGAGCCCGCTCCCGCAGCGAGCCCCTCCGGCCTCGGCCGCGTGGTGCTCTGGGGGACGAATCTGCTGCGACACGGGGCCGGAACTCAGTGGATCGTGGCAGTAAAGGCAACTCTGCCACGATTCTGCCCGTCCATCGTTCGGAACTGCAATTCAGGGCCGCCACGCCGATCTTTATGAGGAGATCGGCGCAGGCGCAGCCCGGCTCACGTGCCCTTGGGGGCGATGTCCCTACTGCCGGTCGGAGTGCGATCGACGAGCTCAGGCGCCGCATCATTAGCGTGGATTATGACTTAGAGGCGTTTGGTCATAATGCTGCATACGTTCACGTTCCCTATTGGTGGGTGAACAATTCAACACTTGGTGAATTCTGCTTCACAATTATTGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCATTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTCAAACTTCGAATAACTAAAAGATCGATAGGCCACACTTTCAAGGTTCGTATTCGCACTGGAAATCAGAATCAAACAAGCTTTTACCCTTTTGTTCCACACGAGATTTTTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCACCCGGATCGACCCGCCGGAGAGGGACTTGAAAGCCAAAAGGAGGGGCAACGCCCCGCCTCTATCTCACGGAATAATCAGATTCCTCTTGACTGTACCAATTCTGAGTCGGTTGTTAGACGCTCGGGGAAGGCCCCGTGGGGCCATTCCCAATCCGTCCCCCAGCCACTCTCGTCGCGGACGCAGCTCAAGCGGTCCGCCGATGGATTTGGGGCTGGGACCCCCGAGCCCAACCCTCAGAGCCAATCCTTTTCCCGAAGTTACAGATCCATTTTGCCGACTTCCCTTGCCTACATTGCTCCATCGACCAGAGGCTGTTCACCTTGGAGACCTGATACGGTTATGACTCCTTGTGCGATTGGAAAGGCGCTTGGAGCTGCGGGCAAGCCAGCCTTTGTTAGCTGCATGGATGCTTGCAGCAAGGAAGAAGATGTGCTCTGTCAAGATAATCAAGCCTCTCGTTTCGATGGAGATCTAGAGCAGATCGGCCATGTCAATGGGAAGAAGATGATGGGCAGCCGAACAGCAGTTAACCTGGCGCAATCATTGGGAGGTCCCAAACGCGATATAAGTGGCAGATTTGTAAAGGCTAGCAGCTCTGTGTCACAACCAGCAAGACCGATCTACTTGGAACCGGCTCCTCCAGCACGAGCATGGAAGCATCGAGCAGCCATCACCATTCCGATCCAGCGGGTTCTTCACTGGAAATCCCAGATCTGA

Network for GWHGAAEX015920

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module2

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF14543.5	TAXi_N	88	252	3.10E-44
PF14541.5	TAXi_C	278	426	1.60E-22

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006508	Biological Process	proteolysis
GO:0004190	Molecular Function	aspartic-type endopeptidase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.790
SRP064423	SRR2545915	Juvenile tuber	0.180
SRP108465	SRR5643513	five period of Gastrodia elata	48.730
	SRR5643514	five period of Gastrodia elata	86.680
	SRR5643515	five period of Gastrodia elata	95.610
	SRR5643524	five period of Gastrodia elata	61.540
	SRR5643525	five period of Gastrodia elata	6.470
	SRR5643528	five period of Gastrodia elata	3.550
	SRR5643658	five period of Gastrodia elata	8.750
	SRR5643659	five period of Gastrodia elata	0.660
	SRR5643660	five period of Gastrodia elata	0.550
	SRR5643661	five period of Gastrodia elata	0.630
	SRR5643662	five period of Gastrodia elata	0.410
	SRR5643663	five period of Gastrodia elata	0.480
	SRR5643664	five period of Gastrodia elata	0.420
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	401.010
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	833.490
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	290.380
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	128.490
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	177.270
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	269.050
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	81.450
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	164.690
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	548.130
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	277.880
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	942.860
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	942.860
SRP279888	Gastro	Gastrodia elata tuber	0.11
	Juven	Juvenile tuber	0.05
	Mother_Gastro	Mother tuber of Gastrodia elata	42.43
	Mother_Juven	Mother tuber of Juvenile	48.97