Gene detail

Detail information of GWHGAAEX015924/CADD01271.1.gene

Functional Annotation

Database	Orthologs	E value	Annotation

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000074	218587	223433	-

Transcript Sequence
>GWHTAAEX015924 ATCCTCTCCTGCTCTTCCTTCGGCTTAGGGTTTCTTTATAATATGCAGATCGCGGGATTTACCACATACCAGTGATTTGATATGACAAATCTCTTAGCAACTCCTACTATTAAGTACCTACTTCTCTTCTTCTCTTCTTCTCTTCTTCTTCTTCTTGAGTTGCAAAGAAAGTATTTATTATTATTATTATTATTATTATTATTATTATTACCACATCTTCTGTGAGTTATTTTTTGCGATTGTAACAAAAACATGATCTCATGGAGTCTTTACATGCGTAGAACTACATCTTGCTCTTCATTTGACTAAAATCTCTTGGAAACGGTCTCAAAGTGGTGTTGATGTTCATGATCACAAGGATCCTTATTCTGCATGCGGGCATATTTGTTATGATTATGATTTCTTCTTCTTTTTTTTCTTTTTTTCTTGTTCTTTTTTTTCCTTCTTTTTTTAAGAGGTCAAGGAATACTTTGGACATACTTGGATACTCGGGAGAATTGTATTGGCAAGTAAAATGTAGTCCCCTGCGTTCTATTCAATGTTACAATAACTATTTTTAATAAGGTAATTTAAAATGTTTATTTGTTGCGGAAGAAACATAATTCTTTGAGTTTTGCAAGGGAAGCTATTCATTTTTTATAGTTGTCAAATTTCAATTACGGATGCTCATCCGCTGGATGCTATGATATATTTGCATCAATCTAAATTTCTTATAGTTGAGTTTTCTCTTACTCCAAGATTGTAGTGGCATCAAGGATGGCTTGATATCCTCAAGCAACCAATGTCATGATATTTATAGAGAAATGCTATTTACACCCGCTGACATTTGCTGGCGTGGCATCTAGAAAAGCCCGTCTAATGGATGTGAACATCATTTCATTTTGGATTCAAGGTCTTAGAGTTTATGTGATTATAAGCTCTTAGGATTTACTCCTCAAATCTTTGTTTGATAGTTTAAGCATATTAAGTGTAGATCGTATATATATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTTAGGGTGTTATGCTGTAGGCGCAAATGTCTTCATGCACCGAGCTATCTTGAATTGAGTTTTTTGTTATATATGAAAATGATACTAAGGGTTTTTTTCATGCTGTAGGCGCAAATGTCTTCATGCACCGAGCTATCTTGAATTGAGTTTTTTGTTATATATGAAAATGATACTAAGGGTTTTTTTCTTGCTTTATATGAACTCATATTGATAGTTTTGCCTTTCTAAATGTTTCTTCTCATGTCTTTTTTGATCTTCTTTTTTTTTAATATGGGCAAAATTCATATAATAAATTTTTTAACATGGACATTGATTTGTCTATGCTTAATATATGTAAATTATCTAAGACCACATTCTCTAACGTTAGTTACAGCCTCAGATTTTCATTTCAAATCAAGAGGAATGTGTTGAAATTGATTCAAGTAATTTATCAAGATGTACTATTGTTTGTTGAAGGAGATCTAAATTGGAATGTAGGAAAAGTAGAGGAATAATATATTCACAGTAGTTTTGATATTGGTTAGATTGATGCAGATAACAATTTTGAGCTATCTTTTTAAGACAACCAATCATTTCTTAAGAAAAGAGGACATGGTGGGTTTTTAAGAATTGATGCTCTTCTTATAGAATAAAAAGATTAATTGTATTGCAAAGATTATAAGATTATTTGTAGAGAAAGCATGACAATATAACAAGCAGGAGGTATTAATGGAATCAGTTTCAAGGCGTTAATGTTTATGATCATAATGATCCCTATTATGCTTGCGGGTTGTTATTGCTATGGTTTTATTCATCTTCATCTTTTATAAAAGTACCGAGTAATTTGGAGCTAACTAGAGAATTATTTTAGCAAATAAAATATAGCCTTTTGCATTTTATTTGATGCTGTTGTAAGTTTTCTTATCTTAGATAATTGCAAATATATATTTGTTGGGATGAAGCACAATTCTCTTTGTTTTGTCTAGGAGCGATTTATTTTTTGTAGTTGTCAAACAGCAATCTATTATTTGTGGATGAAGCACAATTTTCTTTCTTATCTTTAAGGTGCATTGATATATTCCCTATCTGTCGAGATTTTCTGTGGTTGGTTTTTTTTTTTTAATTCATAAGTTCTTTGTTTTATATTGAACAAGGTTTCAAGTTCTAAATCTTAACATGTTGGGTACCAAACAACAACTTTAAACTTTTTGAGAGATGATTGAATACAGATAGTAATATATTATTTTTTATTATTATCCAGCTCAATTTAGTTTCCCTTTTTTAAGTGATGCTTTTTCATTTCAGTTGTGGGGTATTAATAAACCCATCAAACCAACTATTATTTTTTTGTGGCTTTTATAGATAACTCACCGCTACTGTTTGTTTGGGTTCATTTTCTATAGCTTGATGTACTTATTTTTTTTTTGTTAATATTTCATTTAGTTAGTGTCTTTTTTCCTAGTGGAAGTTCTTTCCAATTTTTTTTTTATTTTGCTTAGGTGAATGGGTGCGTTTACTCAAAAAGATAAAATGATAAATAAGCTCATTCCACATAATGGGACTAAGGCTTGGTGGCTGCTTTGGGCAATTAGCCATGTTGTCTATTACATTGTGGTTGCTTAATGATGAACTCAAGTTTCTTAGAGAGCTTTTGGTAGAAAAAGGATTAGTGTTATTAGATATATGTATAATGTTTGGCTATTACACGCGTTTGATTGCTAGTGGTTTGTCTAATGTTTTTCTATTTTAATTGGATTACATCAATGCTCAACTCTCAGCTCATATATTCTTACTTTATCTATGGATATTCTTACTTAGCATATTCAAGTGGAGATTCTTTGTTGGACAATTTTAAAATCTAGATCTAAAAATGCTCTGAGTATATGGAGTGTAAGTTCAATTATATCAGAGTCCCTAATCTCGAGGACATAACTATTGATCATATTATTAAGAAGAGCTAGAGGTTCAAGCACTTGGGTTTACAAGGTTGGAGTGGCACCAATAGTGGTTAAGATTAGAGAATGCTGCCTTTGATGGTTCGGGCATATTAAGTATAGACCATGCAATACCCTGTTAGAAAAATTGAGTTTATGAATTTCTCATATATTAAAAGAGGTAGAGTAGGACCCAAAATGACATGGGAGGAAATTGTTAAGAAGGATCCTCTTTATTTGGAACTCAGGGAGGGGACTTCTATTTGATCGTGCACATACGAAACAAAGGATTAATGTAGTCAACCTCAATGTTAAGTCTTGCCCAAAACAGTATAATATGTAGATCCAAGGCATAATTAGGCATCTTTATCAACATTTCCGGTATGCTTGTGTGCAGATGGTTGCTTGATGCCCGCCCAACAAAATTTTGCTCAATGGTTCTTCCCTAACGAAGGCTGTGTTCAGAATATTTCTTGACTATGGAAATTGATTGTTATCAAATTGAAAAGTTTGGCACTAAATTGGGCTTGTTGAACAGTATGGAAATATATTAATAAACTTGAAATTTTATAGGGGCACTAAATTGGGCTTGTTGAACAGTATGGAAATATATTAATAAACTTGAAATTTTATAGGGGCATATTTGGAAAAATATTTTGAGAAGTTTAAAAAAAGAATGGAATTAAATTTTATTCAATATTGCTTGCAAAGCTATTCTCTATTTACATTCATGACTGGTGACTTTGGAAAAGAGGCAAATATGGTTCCCTGAAACTTTGGTATTTGTCAGAATTTTTCTCTTCTACTTCTGGCAATGTGTAGGCATTTGTTTGTTGGTTTTGCTGTTGCTATTCTTTTCTGTTGCTTTGTTGTTTCGCTGTTAACATTTTCTTATGCTTATTTCCATTCCCTGCATGAGAAAGGTCAAGTGAACTGGGCATTGTGATGTACTCATTGTAATGTTGTTTGAGCTTGGTGATGATTCTCTTACATTCTGGCTGGCCTACCAGAGTTTTTTACATTTAATTTATTAATAACTGCATGAACAGAGAAAAAGAGAATAAGAAGGATTTCTACCATCATGAATGATGGTCTGTAGCTTGTTACTAAGTACAATAGGTGCTGTGAGCTTACATAAGCTTGGGAAGTCAAAACCAAGATACCATTTTCAAATAAAACAAAAGATATATCATACATAGCCCAATATTTGTCTTAATAAGCAGAAGTTGTATTCAAACTTCTGCTTATTAAACTTTATATATATATATATATATATACATATAACTATGCAATTTGAATTTTGCCTGAGATATATTTTCCGATTGTAACAAAAACATGATCTTCTGGTGACTTCACGTGCATAGAATTAAATCTTTTCCTTCATTGAAGAAACACAGCTATTCATTTTTTATAGTTGCCAAATTTCAATTACGGATGCTCTACTGCTGGATGCTATGATATATTTGCATCAGTCTAAATCTCATGGAGTTGAGTTTTTTCTCTTATTCCAAGATTGTAGTGGCATCAAGGATGGC

Network for GWHGAAEX015924

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

>GWHPAAEX015924
ILSCSSFGLGFLYNMQIAGFTTYQFDMTNLLATPTIKYLLLFFSSSLLLLLELQRKYLLLLLLLLLLLLPHLLVIFCDCNKNMISWSLYMRRTTSCSSFDNLLETVSKWCCSSQGSLFCMRAYLLLFLLLFFLFFLFFFFLLFLRGQGILWTYLDTRENCIGKNVVPCVLFNVTITIFNKVINVYLLRKKHNSLSFAREAIHFLLSNFNYGCSSAGCYDIFASIISYSVFSYSKIVVASRMAYPQATNVMIFIEKCYLHPLTFAGVASRKARLMDVNIISFWIQGLRVYVIISSDLLLKSLFDSLSILSVDRIYIYIYIYIYVCVCVCVCMCVLGCYAVGANVFMHRAILNVFCYIKYGFFSCCRRKCLHAPSYLELSFLLYMKMILRVFFLLYMNSYFCLSKCFFSCLFSSFFLIWAKFIIFHGHFVYAYMIIDHILRLQPQIFISNQEECVEIDSSNLSRCTIVCRRSKLECRKSRGIIYSQFYWLDCRQFAIFLRQPIISEKRTWWVFKNCSSYRIKRLIVLQRLDYLRKHDNITSRRYWNQFQGVNVYDHNDPYYACGLLLLWFYSSSSFIKVPSNLELTRELFQIKYSLLHFICCCKFSYLRLQIYICWDEAQFSLFCLGAIYFLLSNSNLLFVDEAQFSFLSLRCIDIFPICRDFLWLVFFFFISSLFYIEQGFKFILTCWVPNNNFKLFERLNTDSNILFFIIIQLNLVSLFVMLFHFSCGVLINPSNQLLFFCGFYRLTATVCLGSFSIACTYFFFVNISFSCLFSWKFFPIFFLFCLGEWVRLLKKIKISSFHIMGLRLGGCFGQLAMLSITLWLLNDELKFLRELLVEKGLVLLDICIMFGYYTRLIASGLSNVFLFLDYINAQLSAHIFLLYLWIFLLSIFKWRFFVGQFNLDLKMLVYGVVQLYQSPSRGHNYSYYEELEVQALGFTRLEWHQWLRLENAAFDGSGILSIDHAIPCKNVYEFLIYKRSRTQNDMGGNCEGSSLFGTQGGDFYLIVHIRNKGLMSTSMLSLAQNSIICRSKALGIFINISGMLVCRWLLDARPTKFCSMVLPRRLCSEYFLTMEIDCYQIEKFGTKLGLLNSMEIYTNFIGALNWACTVWKYINKLEILGHIWKNILRSLKKEWNILFNIACKAILYLHSLVTLEKRQIWFPETLVFVRIFLFYFWQCVGICLLVLLLLFFSVALLFRCHFLMLISIPCMRKVKTGHCDVLIVMLFELGDDSLTFWLAYQSFLHLIYLHEQRKREEGFLPSMMVCSLLLSTIGAVSLHKLGKSKPRYHFQIKQKIYHTPNICLNKQKLYSNFCLLNFIYIYIYIHITMQFEFCLRYIFRLQKHDLLVTSRANIFSFIEETQLFIFYSCQISITDALLLDAMIYLHQSKSHGVEFFLLFQDCSGIKDG

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	3.640
SRP064423	SRR2545915	Juvenile tuber	3.340
SRP108465	SRR5643513	five period of Gastrodia elata	1.440
	SRR5643514	five period of Gastrodia elata	3.740
	SRR5643515	five period of Gastrodia elata	1.690
	SRR5643524	five period of Gastrodia elata	3.360
	SRR5643525	five period of Gastrodia elata	2.510
	SRR5643528	five period of Gastrodia elata	0.000
	SRR5643658	five period of Gastrodia elata	2.750
	SRR5643659	five period of Gastrodia elata	2.020
	SRR5643660	five period of Gastrodia elata	5.680
	SRR5643661	five period of Gastrodia elata	3.220
	SRR5643662	five period of Gastrodia elata	1.570
	SRR5643663	five period of Gastrodia elata	2.010
	SRR5643664	five period of Gastrodia elata	2.430
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	1.470
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	3.860
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	0.700
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	0.270
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	1.420
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.970
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	1.340
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	0.520
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	0.570
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	0.600
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	0.240
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	0.240
SRP279888	Gastro	Gastrodia elata tuber	1.09
	Juven	Juvenile tuber	0.24
	Mother_Gastro	Mother tuber of Gastrodia elata	1.39
	Mother_Juven	Mother tuber of Juvenile	0.37