Detail information of GWHGAAEX015947/evm.TU.scaffold_71.53


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|16330433|ref|NP_441161.1|2.00E-63peptidyl-prolyl cis-trans isomerase [Synechocystis sp. PCC 6803]
KOGKOG08652.00E-83Cyclophilin type peptidyl-prolyl cis-trans isomerase
nrgi|695068374|ref|XP_009381127.1|7.01E-180PREDICTED: peptidyl-prolyl cis-trans isomerase CYP95-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q9LY75|CYP63_ARATH5.00E-84Peptidyl-prolyl cis-trans isomerase CYP63
trEMBLtr|M0RLT4|M0RLT4_MUSAM3.00E-180Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P27100_001}
TAIRAT3G634002.00E-83Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007415073001537653+
Transcript Sequence

Network for GWHGAAEX015947

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00160.20Pro_isomerase121731.00E-43
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006457Biological Processprotein folding
GO:0000413Biological Processprotein peptidyl-prolyl isomerization
GO:0006606Biological Processprotein import into nucleus
GO:0003755Molecular Functionpeptidyl-prolyl cis-trans isomerase activity
GO:0061608Molecular Functionnuclear import signal receptor activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms151.860
SRR2545915Juvenile tuber148.410
SRP108465SRR5643513five period of Gastrodia elata98.160
SRR5643514five period of Gastrodia elata92.300
SRR5643515five period of Gastrodia elata85.730
SRR5643524five period of Gastrodia elata91.900
SRR5643525five period of Gastrodia elata76.720
SRR5643528five period of Gastrodia elata97.530
SRR5643658five period of Gastrodia elata83.720
SRR5643659five period of Gastrodia elata119.330
SRR5643660five period of Gastrodia elata136.700
SRR5643661five period of Gastrodia elata138.050
SRR5643662five period of Gastrodia elata155.530
SRR5643663five period of Gastrodia elata131.510
SRR5643664five period of Gastrodia elata180.310
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1130.550
SRR6049655Rhizomagastrodiae_C368-T10_good_1115.300
SRR6049656Rhizomagastrodiae_C368-T07_good_1120.380
SRR6049657Rhizomagastrodiae_C368-T07_good_1136.570
SRR6049658Rhizomagastrodiae_C368-T04_good_1121.030
SRR6049659Rhizomagastrodiae_C368-T04_good_1138.530
SRR6049660Rhizomagastrodiae_C368-T01_good_1132.910
SRR6049661Rhizomagastrodiae_C368-T04_good_1122.670
SRR6049662Rhizomagastrodiae_C368-T01_good_1121.870
SRR6049663Rhizomagastrodiae_C368-T01_good_1121.990
SRR6049664Rhizomagastrodiae_C368-T10_good_1123.030
SRR6049665Rhizomagastrodiae_C368-T10_good_1123.030
SRP279888GastroGastrodia elata tuber 139.38
JuvenJuvenile tuber137.57
Mother_GastroMother tuber of Gastrodia elata 77.96
Mother_JuvenMother tuber of Juvenile 101.91