Detail information of GWHGAAEX015950/evm.TU.scaffold_71.61


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|189502744|ref|YP_001958461.1|2.00E-26hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
KOGKOG11870Serine/threonine protein kinase
nrgi|672118443|ref|XP_008782431.1|0PREDICTED: proline-rich receptor-like protein kinase PERK8 [Phoenix dactylifera]
Swissprottr|Q9SX31|PERK9_ARATH0Proline-rich receptor-like protein kinase PERK9
trEMBLtr|W9R5N5|W9R5N5_9ROSA0Proline-rich receptor-like protein kinase PERK10 {ECO:0000313|EMBL:EXB72246.1}
TAIRAT1G686900Protein kinase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007421386952168172+
Transcript Sequence

Network for GWHGAAEX015950

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module6

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase4216241.10E-44
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_PERK-1

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms12.460
SRR2545915Juvenile tuber13.070
SRP108465SRR5643513five period of Gastrodia elata26.090
SRR5643514five period of Gastrodia elata13.530
SRR5643515five period of Gastrodia elata27.480
SRR5643524five period of Gastrodia elata18.210
SRR5643525five period of Gastrodia elata14.160
SRR5643528five period of Gastrodia elata11.100
SRR5643658five period of Gastrodia elata8.130
SRR5643659five period of Gastrodia elata18.560
SRR5643660five period of Gastrodia elata19.420
SRR5643661five period of Gastrodia elata25.310
SRR5643662five period of Gastrodia elata19.760
SRR5643663five period of Gastrodia elata18.910
SRR5643664five period of Gastrodia elata14.450
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_18.660
SRR6049655Rhizomagastrodiae_C368-T10_good_113.100
SRR6049656Rhizomagastrodiae_C368-T07_good_16.980
SRR6049657Rhizomagastrodiae_C368-T07_good_18.040
SRR6049658Rhizomagastrodiae_C368-T04_good_12.000
SRR6049659Rhizomagastrodiae_C368-T04_good_11.770
SRR6049660Rhizomagastrodiae_C368-T01_good_15.310
SRR6049661Rhizomagastrodiae_C368-T04_good_12.050
SRR6049662Rhizomagastrodiae_C368-T01_good_15.670
SRR6049663Rhizomagastrodiae_C368-T01_good_13.500
SRR6049664Rhizomagastrodiae_C368-T10_good_17.700
SRR6049665Rhizomagastrodiae_C368-T10_good_17.700
SRP279888GastroGastrodia elata tuber 8.49
JuvenJuvenile tuber14.40
Mother_GastroMother tuber of Gastrodia elata 16.55
Mother_JuvenMother tuber of Juvenile 19.62