Detail information of GWHGAAEX015951/evm.TU.scaffold_71.62


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672164224|ref|XP_008801981.1|8.63E-157PREDICTED: transmembrane protein 33 homolog [Phoenix dactylifera]
trEMBLtr|M0TUS5|M0TUS5_MUSAM7.00E-151Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P29730_001}
TAIRAT3G024204.00E-133Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007421730552222873+
Transcript Sequence

Network for GWHGAAEX015951

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03661.12UPF01211202982.50E-12
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms48.140
SRR2545915Juvenile tuber52.910
SRP108465SRR5643513five period of Gastrodia elata42.780
SRR5643514five period of Gastrodia elata46.840
SRR5643515five period of Gastrodia elata41.050
SRR5643524five period of Gastrodia elata46.560
SRR5643525five period of Gastrodia elata47.320
SRR5643528five period of Gastrodia elata44.650
SRR5643658five period of Gastrodia elata40.670
SRR5643659five period of Gastrodia elata33.100
SRR5643660five period of Gastrodia elata30.390
SRR5643661five period of Gastrodia elata33.810
SRR5643662five period of Gastrodia elata26.960
SRR5643663five period of Gastrodia elata25.800
SRR5643664five period of Gastrodia elata25.270
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_151.790
SRR6049655Rhizomagastrodiae_C368-T10_good_152.550
SRR6049656Rhizomagastrodiae_C368-T07_good_152.370
SRR6049657Rhizomagastrodiae_C368-T07_good_145.880
SRR6049658Rhizomagastrodiae_C368-T04_good_158.260
SRR6049659Rhizomagastrodiae_C368-T04_good_158.320
SRR6049660Rhizomagastrodiae_C368-T01_good_154.820
SRR6049661Rhizomagastrodiae_C368-T04_good_150.220
SRR6049662Rhizomagastrodiae_C368-T01_good_158.450
SRR6049663Rhizomagastrodiae_C368-T01_good_159.670
SRR6049664Rhizomagastrodiae_C368-T10_good_164.470
SRR6049665Rhizomagastrodiae_C368-T10_good_164.470
SRP279888GastroGastrodia elata tuber 51.41
JuvenJuvenile tuber64.64
Mother_GastroMother tuber of Gastrodia elata 62.27
Mother_JuvenMother tuber of Juvenile 74.00