Detail information of GWHGAAEX015954/evm.TU.scaffold_71.66


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|291612500|ref|YP_003522657.1|6.00E-46carbonate dehydratase [Sideroxydans lithotrophicus ES-1]
KOGKOG15786.00E-77Predicted carbonic anhydrase involved in protection against oxidative damage
nrgi|695024920|ref|XP_009399692.1|7.22E-130PREDICTED: beta carbonic anhydrase 5, chloroplastic-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q94CE3|BCA5_ARATH6.00E-103Beta carbonic anhydrase 5, chloroplastic (Precursor)
trEMBLtr|I1IQU9|I1IQU9_BRADI2.00E-128Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}
TAIRAT1G581806.00E-77beta carbonic anhydrase 6

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007424034252411464+
Transcript Sequence

Network for GWHGAAEX015954

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00484.18Pro_CA912426.20E-43
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01673cynT, can Metabolic pathways map01100
Nitrogen metabolismmap00910

Gene Ontology

GO term OntologyName
GO:0015976Biological Processcarbon utilization
GO:0008270Molecular Functionzinc ion binding
GO:0004089Molecular Functioncarbonate dehydratase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms100.410
SRR2545915Juvenile tuber47.290
SRP108465SRR5643513five period of Gastrodia elata78.720
SRR5643514five period of Gastrodia elata63.520
SRR5643515five period of Gastrodia elata64.930
SRR5643524five period of Gastrodia elata61.980
SRR5643525five period of Gastrodia elata41.480
SRR5643528five period of Gastrodia elata53.810
SRR5643658five period of Gastrodia elata68.810
SRR5643659five period of Gastrodia elata21.950
SRR5643660five period of Gastrodia elata32.440
SRR5643661five period of Gastrodia elata26.180
SRR5643662five period of Gastrodia elata23.210
SRR5643663five period of Gastrodia elata24.170
SRR5643664five period of Gastrodia elata27.420
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_168.550
SRR6049655Rhizomagastrodiae_C368-T10_good_155.030
SRR6049656Rhizomagastrodiae_C368-T07_good_159.980
SRR6049657Rhizomagastrodiae_C368-T07_good_1119.850
SRR6049658Rhizomagastrodiae_C368-T04_good_1197.810
SRR6049659Rhizomagastrodiae_C368-T04_good_1222.390
SRR6049660Rhizomagastrodiae_C368-T01_good_187.830
SRR6049661Rhizomagastrodiae_C368-T04_good_1193.250
SRR6049662Rhizomagastrodiae_C368-T01_good_146.340
SRR6049663Rhizomagastrodiae_C368-T01_good_155.490
SRR6049664Rhizomagastrodiae_C368-T10_good_155.940
SRR6049665Rhizomagastrodiae_C368-T10_good_155.940
SRP279888GastroGastrodia elata tuber 72.94
JuvenJuvenile tuber48.63
Mother_GastroMother tuber of Gastrodia elata 635.52
Mother_JuvenMother tuber of Juvenile 137.02