Detail information of GWHGAAEX015958/evm.TU.scaffold_71.72


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|357419294|ref|YP_004932286.1|2.00E-37Endonuclease V [Thermovirga lienii DSM 17291]
KOGKOG44175.00E-97Predicted endonuclease
nrgi|743809912|ref|XP_010928746.1|2.72E-130PREDICTED: endonuclease V isoform X2 [Elaeis guineensis]
trEMBLtr|M0RFV6|M0RFV6_MUSAM1.00E-126Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P06290_001}
TAIRAT4G311505.00E-97endonuclease V family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007426087992624655+
Transcript Sequence

Network for GWHGAAEX015958

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04493.13Endonuclease_5572541.70E-67
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0006281Biological ProcessDNA repair
GO:0004519Molecular Functionendonuclease activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms13.220
SRR2545915Juvenile tuber17.730
SRP108465SRR5643513five period of Gastrodia elata10.550
SRR5643514five period of Gastrodia elata17.240
SRR5643515five period of Gastrodia elata14.910
SRR5643524five period of Gastrodia elata18.030
SRR5643525five period of Gastrodia elata18.690
SRR5643528five period of Gastrodia elata20.530
SRR5643658five period of Gastrodia elata22.150
SRR5643659five period of Gastrodia elata11.070
SRR5643660five period of Gastrodia elata11.260
SRR5643661five period of Gastrodia elata11.450
SRR5643662five period of Gastrodia elata12.760
SRR5643663five period of Gastrodia elata11.520
SRR5643664five period of Gastrodia elata11.660
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_112.880
SRR6049655Rhizomagastrodiae_C368-T10_good_112.000
SRR6049656Rhizomagastrodiae_C368-T07_good_115.310
SRR6049657Rhizomagastrodiae_C368-T07_good_112.920
SRR6049658Rhizomagastrodiae_C368-T04_good_115.930
SRR6049659Rhizomagastrodiae_C368-T04_good_114.390
SRR6049660Rhizomagastrodiae_C368-T01_good_112.700
SRR6049661Rhizomagastrodiae_C368-T04_good_114.920
SRR6049662Rhizomagastrodiae_C368-T01_good_114.090
SRR6049663Rhizomagastrodiae_C368-T01_good_120.640
SRR6049664Rhizomagastrodiae_C368-T10_good_123.260
SRR6049665Rhizomagastrodiae_C368-T10_good_123.260
SRP279888GastroGastrodia elata tuber 6.55
JuvenJuvenile tuber10.70
Mother_GastroMother tuber of Gastrodia elata 22.16
Mother_JuvenMother tuber of Juvenile 10.79