Detail information of GWHGAAEX015964/evm.TU.scaffold_71.78


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|46446345|ref|YP_007710.1|2.00E-08hypothetical protein pc0711 [Candidatus Protochlamydia amoebophila UWE25]
KOGKOG15504.00E-125Extracellular protein SEL-1 and related proteins
nrgi|743769207|ref|XP_010914884.1|7.15E-148PREDICTED: uncharacterized protein LOC105040173 isoform X2 [Elaeis guineensis]
trEMBLtr|M0TFS2|M0TFS2_MUSAM4.00E-143Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P08320_001}
TAIRAT2G255704.00E-125binding

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007429753943008391-
Transcript Sequence

Network for GWHGAAEX015964

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08238.11Sel11181512.6
PF08238.11Sel11551894.00E-06
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms15.990
SRR2545915Juvenile tuber20.840
SRP108465SRR5643513five period of Gastrodia elata35.150
SRR5643514five period of Gastrodia elata47.950
SRR5643515five period of Gastrodia elata42.480
SRR5643524five period of Gastrodia elata42.650
SRR5643525five period of Gastrodia elata14.420
SRR5643528five period of Gastrodia elata24.570
SRR5643658five period of Gastrodia elata30.790
SRR5643659five period of Gastrodia elata17.470
SRR5643660five period of Gastrodia elata15.940
SRR5643661five period of Gastrodia elata17.970
SRR5643662five period of Gastrodia elata18.350
SRR5643663five period of Gastrodia elata17.200
SRR5643664five period of Gastrodia elata23.260
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_121.270
SRR6049655Rhizomagastrodiae_C368-T10_good_113.200
SRR6049656Rhizomagastrodiae_C368-T07_good_119.600
SRR6049657Rhizomagastrodiae_C368-T07_good_122.520
SRR6049658Rhizomagastrodiae_C368-T04_good_119.470
SRR6049659Rhizomagastrodiae_C368-T04_good_118.860
SRR6049660Rhizomagastrodiae_C368-T01_good_120.760
SRR6049661Rhizomagastrodiae_C368-T04_good_119.760
SRR6049662Rhizomagastrodiae_C368-T01_good_117.780
SRR6049663Rhizomagastrodiae_C368-T01_good_120.920
SRR6049664Rhizomagastrodiae_C368-T10_good_118.990
SRR6049665Rhizomagastrodiae_C368-T10_good_118.990
SRP279888GastroGastrodia elata tuber 26.90
JuvenJuvenile tuber26.82
Mother_GastroMother tuber of Gastrodia elata 30.78
Mother_JuvenMother tuber of Juvenile 23.86