Gene detail

Detail information of GWHGAAEX015971/evm.TU.scaffold_71.93

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|18978257\|ref\|NP_579614.1\|	9.00E-13	glycosyl transferase family protein [Pyrococcus furiosus DSM 3638]
KOG	KOG0853	0	Glycosyltransferase
nr	gi\|695006824\|ref\|XP_009389932.1\|	0	PREDICTED: uncharacterized protein LOC103976456 [Musa acuminata subsp. malaccensis]
trEMBL	tr\|M0S9F8\|M0S9F8_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr2P19670_001}
TAIR	AT1G52420	0	UDP-Glycosyltransferase superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000074	3486401	3513941	-

Transcript Sequence
>GWHTAAEX015971 AACTAAATAAGCTTTTTATAGGATCCGTCACCACTGCTGGGGGCACAGCAGCGCAGGGGAAGTAAACGGGAACAGTTTCTCTGTTACCCTTGATGCAGTGATCCCGATCAATGTCTTCCACTCTCAAAAGGCTAGCACCCTTCTTCAATCTTCATATCACTTTTACCTCAGAAAATCCTACGCTAGGGTTCTGCGTACTCCTGGTGAAGAAATTGACTTGCCATTGTCTGATAAGGTTGGCAGCCGAAGACTGAGTTACTAGCTACAAACCCCGAGCATTGCTTAATGGGCTCCTGCGATGAACAACTAACAGCTATATCTAAGCTTCTGATTCCCGGCTCGAATTCTCTTTTCTTTTTTTAAGCTTGCTGCTAGCTTTTTGTTGAATGAGAAGTAGGCATGGAAGAAACTAGCAGGAAAGGGGAAGCTTACGGAAATTTACTGAGACTAAATTCAGTACGGTCTCCTGGAAGCTTAAAAACTTCCCTTTCCGGTAGATCTGGTGCAAGGAACCCAGTTTCTCTCCGAAGATTGCAATCTACTAGAATTCCTCGTCGGGATTTGAAAGCTGGATCAGGGAGTCTGCATTGGATCAGTAGCAATCGAGTGGTATTTTGGCTGCTTTTGATTACTATGTGGGCTTATATCGGGTTTCATGTGCAGTCGAAGTGGGCTCATGGTCACCACGGGAAGAAAGAGTTTGTTGGGTACAAGGGTGAACCAGTCAGTATCAAGAACCAAGACGACGCAACAAAAGATGCAGAGTCTATTGAATCCAAACCTTCCAATTTTGTTCTGAAAGAATCTGATTCAATTGACTCAAAGTTTTCTGTAAAACGGTTGTCAAGGATAATAAATCCTTCTCCAAGAAAGAGAGGTAGAAGGATGCTAAAGAAGGTGATGCCAAATGTTCCTGTGGTGGTGCTGGATAACACAGAAACTGAGCCGGATGATGTTATAATTCTGAACAGAAACAATACATTTGGATTGATGGTTGGGCCATTCAGTAATATTGAGGACAGAGTTTTGGAGTGGAGTTCCGATAAGCGCAAAGGGACTTGTGATAGAAAAGGAAGATTTGCAAAGCTTGTCTGGTCGCGCACGTTTATATTGATTTTTCATGAACTCTCAATGACAGGTGCTCCACTTTCAATGATGGAATTGGCTACAGAGCTTTTGAGCTGTGGAGGATATGTAAAGGTAGTTGTACTAAGTAAGAAAGGTGGCTTGATGAATGAACTTGATAACAGGGGTATCAGTGTACTTGAGGATAAGGGAGAGATTAGTTTTAAGGCTGCCATGAAAGCAGACCTTGTTGTAGCTGGATCTGCTGTCAGTGCATCTTGGATTGAGCAATATCTCAGACGTAATCCAGCTGGATCAAACCAACTTGTCTGGTGGATTATGGAGAATCGACAAGAATATTTTAACAGATCAAAACATATGTTAGGTCATGTGAAAAAGCTGATGTTTTTGTCTGATATACAGTCTAACCTATGGTTATCTTGGTCCAAAGAGGAAAACATCAAGTTAAAATCAGAGCCTATAGCGGTGCCTCTTTCTGTTAGTGATGAATTGGCATTTGCTGCAGGCATTCAGTGCTCCTTAAATACACCTGCATTCAGTGTTGAGGTGATGATGAAGAAGAGGGACGCCTTGAGAATTGCAGTTCGTAAAGGTATGGGGTTGTCTGATGATGATATGCTTGTAATGACTTTAAGTAGTGTAAATCCTACTAAGGGCCAGCTGCTAATTCTTGAGGCAGCTCATTTAGTTGCTGAGCAAAATGTTTCTCAGCGAGATCCTATAGTAATTGAGAAAGAGCTGTCACTTTATTCGCATCAGAATCAAAGCAATGCAAATAATAAGTTAGGGACTGAGCCGCTACAATTGGAAACCAACCAGACTGGAAGTAAAGCTGAAGCTAATCGTAAAACCAAAACAGCTAGTGGAGTTTTGAAGAAGAAGAAGAGAAAACATTCTAGATCAAATAAAGTCGCCTTGCAAAATGACACTGAGGATGTGAAACCAGATCGGAGAAAGTTTAGGCATTTATTAGCTGACAAAGCTGGTGTTGAACATCAAAACCTCAAGATTCTAATTGGGTCTATTGGTTCAAAAAGCAATAAAACCCCATATGTAAAAGGACTTATGAGATTTCTTTCTCAGAGTTCAAACATGTCAAATTTAGTCTTTTGGACTCGTGCAACCACTCGAGTTATTTCATTGTATGCAGCGGCAGATGTTTATATAATAAACTCCCAGGGAAGTGGAGAGACATTTGGAAGGGTTACGATTGAGGCTATGGCATTTGGTTTGCCGGTTCTTGGAACTGATGGCGGAGGGACACGAGAGATAGTGAAGGACAAAGTGACTGGCCTGCTTCATCCGCTGGGCCATGAGGGAACAAAGTCTCTTGCGCAGAATATTCAGTTTTTACTTCAAAATCCATTGGCGAGGAAGAAGATGGGATTGCTTGGAAGACGAGCAGTGCAAGACAAATACCTCAAGCATCACACTTACAGCAAATTGGCTGATGTCTTCATGAAATGCATGAAGGTCAAATAATAATAATAATTTCATTATGGATTTTTGTGGTATGTTTCTTAGCCCTGCATTGAAATTTTTATTTATTATATTATTTGATTATGATATCAAAGCCTTCTACTTTTCTTTCTTAGTTTGTTGATTGAGCTGTAATTTGCCTGTTGTTTCATGTTGGCTGGTGAATCTTCATTTGTATTATGTTTTTTTCTACTAGTTTCTTTTTCATCATTCTCATAAGCAA

Network for GWHGAAEX015971

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF16994.4	Glyco_trans_4_5	232	401	2.10E-63
PF00534.19	Glycos_transf_1	586	691	8.50E-19

Protein Sequence

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GT4
Carbohydrate-Active enzymes Family	GT4

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	34.300
SRP064423	SRR2545915	Juvenile tuber	41.640
SRP108465	SRR5643513	five period of Gastrodia elata	34.740
	SRR5643514	five period of Gastrodia elata	32.790
	SRR5643515	five period of Gastrodia elata	30.570
	SRR5643524	five period of Gastrodia elata	29.240
	SRR5643525	five period of Gastrodia elata	45.350
	SRR5643528	five period of Gastrodia elata	42.050
	SRR5643658	five period of Gastrodia elata	37.760
	SRR5643659	five period of Gastrodia elata	30.060
	SRR5643660	five period of Gastrodia elata	26.540
	SRR5643661	five period of Gastrodia elata	29.740
	SRR5643662	five period of Gastrodia elata	26.140
	SRR5643663	five period of Gastrodia elata	29.480
	SRR5643664	five period of Gastrodia elata	23.980
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	33.820
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	32.280
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	37.840
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	32.190
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	24.510
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	24.060
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	33.530
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	31.050
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	40.800
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	31.080
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	39.170
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	39.170
SRP279888	Gastro	Gastrodia elata tuber	20.70
	Juven	Juvenile tuber	30.50
	Mother_Gastro	Mother tuber of Gastrodia elata	24.86
	Mother_Juven	Mother tuber of Juvenile	17.53