Detail information of GWHGAAEX015975/evm.TU.scaffold_71.98


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|428224959|ref|YP_007109056.1|4.00E-72L-aspartate aminotransferase [Geitlerinema sp. PCC 7407]
KOGKOG02570Kynurenine aminotransferase, glutamine transaminase K
nrgi|695042590|ref|XP_009408957.1|0PREDICTED: bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase [Musa acuminata subsp. malaccensis]
Swissprottr|E9L7A5|PAT_PETHY1.00E-35Bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase (Precursor)
trEMBLtr|M0TG79|M0TG79_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P09910_001}
TAIRAT1G803600Pyridoxal phosphate (PLP)-dependent transferases superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007438380923885615+
Transcript Sequence

Network for GWHGAAEX015975

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00155.20Aminotran_1_2313824.30E-48
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00837ISS1, VAS1 Metabolic pathways map01100
Cysteine and methionine metabolismmap00270
Tryptophan metabolismmap00380

Gene Ontology

GO term OntologyName
GO:0009058Biological Processbiosynthetic process
GO:0003824Molecular Functioncatalytic activity
GO:0030170Molecular Functionpyridoxal phosphate binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms26.240
SRR2545915Juvenile tuber27.920
SRP108465SRR5643513five period of Gastrodia elata42.520
SRR5643514five period of Gastrodia elata47.900
SRR5643515five period of Gastrodia elata40.390
SRR5643524five period of Gastrodia elata49.200
SRR5643525five period of Gastrodia elata50.830
SRR5643528five period of Gastrodia elata50.140
SRR5643658five period of Gastrodia elata61.330
SRR5643659five period of Gastrodia elata10.890
SRR5643660five period of Gastrodia elata11.920
SRR5643661five period of Gastrodia elata12.030
SRR5643662five period of Gastrodia elata11.150
SRR5643663five period of Gastrodia elata14.620
SRR5643664five period of Gastrodia elata11.440
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_139.440
SRR6049655Rhizomagastrodiae_C368-T10_good_141.560
SRR6049656Rhizomagastrodiae_C368-T07_good_150.660
SRR6049657Rhizomagastrodiae_C368-T07_good_139.330
SRR6049658Rhizomagastrodiae_C368-T04_good_150.660
SRR6049659Rhizomagastrodiae_C368-T04_good_147.730
SRR6049660Rhizomagastrodiae_C368-T01_good_139.220
SRR6049661Rhizomagastrodiae_C368-T04_good_144.190
SRR6049662Rhizomagastrodiae_C368-T01_good_154.110
SRR6049663Rhizomagastrodiae_C368-T01_good_146.540
SRR6049664Rhizomagastrodiae_C368-T10_good_171.440
SRR6049665Rhizomagastrodiae_C368-T10_good_171.440
SRP279888GastroGastrodia elata tuber 18.67
JuvenJuvenile tuber24.82
Mother_GastroMother tuber of Gastrodia elata 85.51
Mother_JuvenMother tuber of Juvenile 55.48