Gene detail

Detail information of GWHGAAEX015982/evm.TU.scaffold_71.112

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|695054061\|ref\|XP_009415148.1\|	2.39E-117	PREDICTED: uncharacterized protein LOC103996063 [Musa acuminata subsp. malaccensis]
trEMBL	tr\|K4CPN7\|K4CPN7_SOLLC	2.00E-65	Uncharacterized protein {ECO:0000313\|EnsemblPlants:Solyc08g082410.2.1}
trEMBL	tr\|K4CPN7\|K4CPN7_SOLLC	1.00E-14	Uncharacterized protein {ECO:0000313\|EnsemblPlants:Solyc08g082410.2.1}
TAIR	AT5G53440	2.00E-39	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000074	4492882	4512124	+

Transcript Sequence
>GWHTAAEX015982 ATGCCGAGGAGTTCTCGCCACAAGTCCCACCGGTCTCATAAGCATAACTCGAGAGATGCGCGGGAGCGTTCTGATTCTGAGGATGATGGAGTCTGTAGGGATCGTAGGCAGAGAGTAGAGGAAGCAGGCAGTTGTTCAGGGGCTAGGGTTTCAAGGGATGTGGAGGCGGACAAGAGAAAATCGTCGACTTCCGTATACGTTTCACAGGAGAAGGATAGGGGTGTTGCTGAAAATGGAGATTCTTCCGTGGAACATGGCAGGAAGCGGAAAGAGAGAGGGGACGGCTGTGTTACTCCCGATAGATGGAATGGTAGTGGAAAAGATGATAGATTTTCTGAGAAGGTTTGTAAAGATGACTGTTTGGTATCTTTGGATACGGATAAAGGGGAGAAGTCGAGAGTTTTGACTGTTGAATCCAAAAGTAGGTCTAGTAGAAGACGTGAGGTATCTGTAGATAGGCATGCCGTCAGTAGCAGTAGGACTGAGTCTTTGAAGAAGAGGCCTGAGAAGGAATACAGCAGAAAGGAGATTAGGGAGGATAAAGAAAGGGAAGTTGAACGTGCTTCTGAGAGTGAAAAGGATCGAGAACGTGCATCAGAGAGGGACAGGAGAGTTCAGGATTCTAGGCATGAGAAATCTGCTGATGTAGAGATTAGGAACCAAGGTTCCAGAAGAGGAGGCACTGAAGGGGAGCGGTCGACAAAAAAGGATAGTACTGGATTTCAAGCTCGAGAGGATATGCCAAATACAGATTTAGAGAAAGAACCTGAGAAATCCGCCACAAAGAAAGGAAGGGGCTCCGGTGGATTTGACAAATGGCATGATGATAGTAGGAACATTGATGACAGGAGGCTTTCTTCTGCTGATGATCGCATTAAGAATGGAGGCCATAAGGTTGAGGTTCACAAAGATGAAAGGTACAAAGATGAAAGGTACAAAGATGAAAGGCACAAAGATGAAAGGTACAAAGATGAAAGGTATAGAGACGAAAGGCATAAAGATGAAAGATATAAAGAGGAAAGGTACAAAGAGGAAAAGTATCGAGAGGAAAGGTACAGAGATGAAAAATATCGGGACAAGCATTACAGGGATAATGATAGGGATCATAAGCATCGCGATATCAGGCCCAGGGAAGATCGCTCTTCAAGAGACTATGCTAGTGATAGACTTGAAGGTAAATCTGCCAAGGACAGAAACAAACTTGTTGAGAGTTACTCCAAGAAAGTTAAGCCTCATAGTAGTGAACTTGAAGTTAGCCCACAAGTAGAGGTTCATGGAATGAAAGCAAAAGATAACCGGGCTCATAGAAGTTCTTATGATGAAAATGATGATCATCATGGTCAAAAACATAGAAATGCCAAAGAGACACGTTCAGATGCAGAGAAGGATGCATCCAATTTGAGTAAGATTGATTATAAACATCAAGGCAGGATTGATTCTTCTCTATCAAATAACCAGTCAAAAAGTTCTATCAGCCCAATTGCTCACACTTTGAAAGATCACAATAGGCGTACCTTAAAACAAGCAGATCATGCAAATAGAGAACCAGTCTCTGATGATAGAGTTCGCCGTGCAGAAGACCATGATAGAGTTTCAGTGATTCACGAGAGAATTTCTGATTCTATTTCTTTAGAAAAAATCAAACACAGAGATAGAATAAAATCAGATGATAGGGAACGGCAGTTATCGCTAGAGAATCAGAGTATGGAAAACCATTTTCATAATAGTGAGCGCATTTCTATTTCTACATCACCATTCAAACGTACTGTTAACTTTTCTGGGAGTTCTCCTGGTCATCTTCTCTCTCAGCCTACTATGAGACATGGAAGGGACAGCCCTTCTGTTTATGAGGATGATAATAGATTAAAATCAGTAGACCGGAGACCCAACAATCGTTACAAGAGAAATTATGATCCAAATATTGATAGAGGTCAGGGAGTGGTGACATGGAAAAATGGACCAACTTGGCCATCTCCAGTGCCGAATGGTTTCATACCATTTCAACCCCCCCCTCCTGCGTTTCATTCAGGTCTTCAGCATTTTCCACCTCCTTCCTTGTTTGGTGCAAGGCCATATATGGAGATTACTCAACCTGGAATTCCCTATCACATGCATGAGGTAGCAGACCGGTTTACTGGTCATGGCCATCCATTTGGGTGGCATCATCCAGCAGATGCTTCCTGTCTCCCTCAAATGCAAGGGTGGGATGGTAGTAATCCTCTTTTCGGTGATAAATCACAAGCATATGTGAGACCTGATTGGGATCCGAATAGACATCTAGTGGGTGGGCGTGGTTGGGAGTTGAATGCTGAAATGTGGAAGGGACAGGTTGCAAGCATGAATGCTGAGTTCTCTGCTCCACTGGAGTTAGCTGATGATTCAAAACGTTCATATTCTAGCCTTCAACCAAAGAATGATGTGGACCATCTGCAACGTGCTTCAGGTGTTTCCACTTATATAAAGCAAAACAACAATCCTCCACATGATAATTCTGTAGAAGCCTCTATTGGAACTGATCTTGGAAGGAATTCTCTACTTGGTAAAAAGCTCAATAACAACAGCCTGAACTTAAACACTTATTTATCCAGGGTTGAAGTTTCAGCTGATCTTACGTACCCTGAACTATATAAGGAGATTAAAAATATATTAACTGCTGATAATTTAACTCCTATTTGCAGTTCTTCCATGGATGAAACTACTAAGAAGCGTAAAGCTCAATTTTCATTGAAGGCTTTTAAAATGGGTTCTTTTTCTGAAACTGCAGCTGATGCTGTTTTCAAGAGAGCCAAGTTGATTTACGAGCAGCAGGCCAGTGGAAGGAGAGCGAAGCCGCTGCCTTCAGCTTTATCCGCCTTATCAAAGGAGGAGAGCGCTTCTTCCCCTCCTCCGCTGGAGGTCATCAGCAGCAACGAAACGAATGCAGGCAGCAGCGCTTCTGAGCCCCAATATACTACCGCCGAAATGCAGGGCTCGGATGGTAATGCAGAGAGGCCTGCCTCCGCTGAGGAAGAAGATTTAGAGAGCATTACTGTTGCTGGGGGTGATGATGACAGTAGTGAGCAGCAATCAGACCTTAAACCTGATGTTGTTCTTGTGGAGAGTCCTCAGGCATGTGAGGGTATTATGCCAGATTGTAAGGTAAATTTAACTCGGATACATAACCCTCCTGAAAGCGCCCATTAGAACACTAAAATTCTCTCTCTCTCTCTCTTTCAATGTTTTTTCTTACTTCTTTAATGCCCGCCGGCCATTCTAGTTGAGGGTTATCGGTCTTTTTATTATGGCGCTGCCTCCTGCTGCTTGCTCGCTCGCTCGCTCGCTCATGTTTCTGCATGAATAAAACTTATTTTTTTTTCCTTATTTCTTTTGGGCTTCGATCGCTGCATTATATATTTTGATTTTTTAGTTCTTTAATTAATTGCTGGAAGAAAATTAAAGGCTTTTTCAAATGATTATTTCATTTGATTTTCAAAATGCGTCACAAAAAGCATTGTTGTTATTGGAAAATTGTATGATTACACAAAAATTAATACGAATGTCTAGATGGGTCTGACAATTTTATCT

Network for GWHGAAEX015982

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

>GWHPAAEX015982
MPRSSRHKSHRSHKHNSRDARERSDSEDDGVCRDRRQRVEEAGSCSGARVSRDVEADKRKSSTSVYVSQEKDRGVAENGDSSVEHGRKRKERGDGCVTPDRWNGSGKDDRFSEKVCKDDCLVSLDTDKGEKSRVLTVESKSRSSRRREVSVDRHAVSSSRTESLKKRPEKEYSRKEIREDKEREVERASESEKDRERASERDRRVQDSRHEKSADVEIRNQGSRRGGTEGERSTKKDSTGFQAREDMPNTDLEKEPEKSATKKGRGSGGFDKWHDDSRNIDDRRLSSADDRIKNGGHKVEVHKDERYKDERYKDERHKDERYKDERYRDERHKDERYKEERYKEEKYREERYRDEKYRDKHYRDNDRDHKHRDIRPREDRSSRDYASDRLEGKSAKDRNKLVESYSKKVKPHSSELEVSPQVEVHGMKAKDNRAHRSSYDENDDHHGQKHRNAKETRSDAEKDASNLSKIDYKHQGRIDSSLSNNQSKSSISPIAHTLKDHNRRTLKQADHANREPVSDDRVRRAEDHDRVSVIHERISDSISLEKIKHRDRIKSDDRERQLSLENQSMENHFHNSERISISTSPFKRTVNFSGSSPGHLLSQPTMRHGRDSPSVYEDDNRLKSVDRRPNNRYKRNYDPNIDRGQGVVTWKNGPTWPSPVPNGFIPFQPPPPAFHSGLQHFPPPSLFGARPYMEITQPGIPYHMHEVADRFTGHGHPFGWHHPADASCLPQMQGWDGSNPLFGDKSQAYVRPDWDPNRHLVGGRGWELNAEMWKGQVASMNAEFSAPLELADDSKRSYSSLQPKNDVDHLQRASGVSTYIKQNNNPPHDNSVEASIGTDLGRNSLLGKKLNNNSLNLNTYLSRVEVSADLTYPELYKEIKNILTADNLTPICSSSMDETTKKRKAQFSLKAFKMGSFSETAADAVFKRAKLIYEQQASGRRAKPLPSALSALSKEESASSPPPLEVISSNETNAGSSASEPQYTTAEMQGSDGNAERPASAEEEDLESITVAGGDDDSSEQQSDLKPDVVLVESPQACEGIMPDCKVNLTRIHNPPESAH

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	32.820
SRP064423	SRR2545915	Juvenile tuber	31.040
SRP108465	SRR5643513	five period of Gastrodia elata	22.380
	SRR5643514	five period of Gastrodia elata	19.570
	SRR5643515	five period of Gastrodia elata	20.050
	SRR5643524	five period of Gastrodia elata	19.310
	SRR5643525	five period of Gastrodia elata	20.280
	SRR5643528	five period of Gastrodia elata	18.260
	SRR5643658	five period of Gastrodia elata	17.650
	SRR5643659	five period of Gastrodia elata	20.160
	SRR5643660	five period of Gastrodia elata	24.500
	SRR5643661	five period of Gastrodia elata	17.570
	SRR5643662	five period of Gastrodia elata	21.820
	SRR5643663	five period of Gastrodia elata	20.710
	SRR5643664	five period of Gastrodia elata	20.980
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	23.050
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	22.220
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	19.720
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	31.300
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	28.700
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	34.810
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	27.240
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	26.730
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	17.530
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	20.500
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	16.280
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	16.280
SRP279888	Gastro	Gastrodia elata tuber	25.32
	Juven	Juvenile tuber	43.76
	Mother_Gastro	Mother tuber of Gastrodia elata	28.97
	Mother_Juven	Mother tuber of Juvenile	46.89