Detail information of GWHGAAEX015990/evm.TU.scaffold_72.8


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|325280864|ref|YP_004253406.1|3.00E-31TIR protein [Odoribacter splanchnicus DSM 220712]
KOGKOG02290Phosphatidylinositol-4-phosphate 5-kinase
nrgi|743772505|ref|XP_010916562.1|0PREDICTED: phosphatidylinositol 4-phosphate 5-kinase 1-like isoform X1 [Elaeis guineensis]
Swissprottr|Q6EX42|PI5K1_ORYSJ0Phosphatidylinositol 4-phosphate 5-kinase 1 (Precursor)
trEMBLtr|M0SA86|M0SA86_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr2P22450_001}
TAIRAT1G109000Phosphatidylinositol-4-phosphate 5-kinase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000071447145498604+
Transcript Sequence

Network for GWHGAAEX015990

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02493.19MORN31520.00054
PF02493.19MORN54750.00024
PF02493.19MORN77998.2
PF02493.19MORN1001210.39
PF02493.19MORN1231451.60E-05
PF02493.19MORN1461660.0018
PF02493.19MORN1701900.004
PF02493.19MORN1922120.0075
PF01504.17PIP5K4557867.70E-87
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00889PIP5K Metabolic pathways map01100
Inositol phosphate metabolismmap00562
MAPK signaling pathway - yeastmap04011
Phosphatidylinositol signaling systemmap04070
Phospholipase D signaling pathwaymap04072
Endocytosismap04144
Mitophagy - yeastmap04139
Regulation of actin cytoskeletonmap04810
Fc gamma R-mediated phagocytosismap04666

Gene Ontology

GO term OntologyName
GO:0046488Biological Processphosphatidylinositol metabolic process
GO:0016307Molecular Functionphosphatidylinositol phosphate kinase activity
GO:0016308Molecular Function1-phosphatidylinositol-4-phosphate 5-kinase activity
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms50.560
SRR2545915Juvenile tuber42.460
SRP108465SRR5643513five period of Gastrodia elata25.030
SRR5643514five period of Gastrodia elata22.280
SRR5643515five period of Gastrodia elata19.680
SRR5643524five period of Gastrodia elata20.400
SRR5643525five period of Gastrodia elata18.310
SRR5643528five period of Gastrodia elata14.590
SRR5643658five period of Gastrodia elata17.690
SRR5643659five period of Gastrodia elata20.460
SRR5643660five period of Gastrodia elata21.130
SRR5643661five period of Gastrodia elata18.140
SRR5643662five period of Gastrodia elata15.560
SRR5643663five period of Gastrodia elata15.910
SRR5643664five period of Gastrodia elata16.140
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_137.500
SRR6049655Rhizomagastrodiae_C368-T10_good_123.170
SRR6049656Rhizomagastrodiae_C368-T07_good_127.520
SRR6049657Rhizomagastrodiae_C368-T07_good_143.280
SRR6049658Rhizomagastrodiae_C368-T04_good_139.880
SRR6049659Rhizomagastrodiae_C368-T04_good_148.590
SRR6049660Rhizomagastrodiae_C368-T01_good_141.970
SRR6049661Rhizomagastrodiae_C368-T04_good_136.120
SRR6049662Rhizomagastrodiae_C368-T01_good_128.350
SRR6049663Rhizomagastrodiae_C368-T01_good_130.790
SRR6049664Rhizomagastrodiae_C368-T10_good_125.310
SRR6049665Rhizomagastrodiae_C368-T10_good_125.310
SRP279888GastroGastrodia elata tuber 18.22
JuvenJuvenile tuber41.25
Mother_GastroMother tuber of Gastrodia elata 17.31
Mother_JuvenMother tuber of Juvenile 24.55