Detail information of GWHGAAEX015991/evm.TU.scaffold_72.9


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|326495354|dbj|BAJ85773.1|3.68E-87predicted protein [Hordeum vulgare subsp. vulgare]
trEMBLtr|F2CSF2|F2CSF2_HORVD1.00E-87Predicted protein {ECO:0000313|EMBL:BAJ85773.1}
TAIRAT2G010802.00E-43Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000071501747502972+
Transcript Sequence

Network for GWHGAAEX015991

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03168.12LEA_21062052.10E-12
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.370
SRR2545915Juvenile tuber1.300
SRP108465SRR5643513five period of Gastrodia elata2.880
SRR5643514five period of Gastrodia elata3.580
SRR5643515five period of Gastrodia elata2.620
SRR5643524five period of Gastrodia elata2.320
SRR5643525five period of Gastrodia elata27.680
SRR5643528five period of Gastrodia elata15.340
SRR5643658five period of Gastrodia elata12.010
SRR5643659five period of Gastrodia elata1.490
SRR5643660five period of Gastrodia elata0.950
SRR5643661five period of Gastrodia elata1.720
SRR5643662five period of Gastrodia elata2.980
SRR5643663five period of Gastrodia elata3.050
SRR5643664five period of Gastrodia elata3.140
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_13.270
SRR6049655Rhizomagastrodiae_C368-T10_good_19.200
SRR6049656Rhizomagastrodiae_C368-T07_good_13.810
SRR6049657Rhizomagastrodiae_C368-T07_good_13.980
SRR6049658Rhizomagastrodiae_C368-T04_good_14.200
SRR6049659Rhizomagastrodiae_C368-T04_good_14.650
SRR6049660Rhizomagastrodiae_C368-T01_good_13.160
SRR6049661Rhizomagastrodiae_C368-T04_good_14.230
SRR6049662Rhizomagastrodiae_C368-T01_good_19.510
SRR6049663Rhizomagastrodiae_C368-T01_good_14.410
SRR6049664Rhizomagastrodiae_C368-T10_good_14.810
SRR6049665Rhizomagastrodiae_C368-T10_good_14.810
SRP279888GastroGastrodia elata tuber 3.04
JuvenJuvenile tuber5.17
Mother_GastroMother tuber of Gastrodia elata 7.79
Mother_JuvenMother tuber of Juvenile 8.53