Detail information of GWHGAAEX016000/evm.TU.scaffold_72.23


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743772765|ref|XP_010916694.1|1.51E-117PREDICTED: GEM-like protein 1 [Elaeis guineensis]
Swissprottr|Q9SE96|GEML1_ARATH2.00E-101GEM-like protein 1
trEMBLtr|A0A061FEP7|A0A061FEP7_THECC9.00E-112FH interacting protein 1 {ECO:0000313|EMBL:EOY15388.1}
TAIRAT1G282007.00E-101FH interacting protein 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007112625691280006+
Transcript Sequence

Network for GWHGAAEX016000

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02893.19GRAM1352515.90E-27
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms39.670
SRR2545915Juvenile tuber60.230
SRP108465SRR5643513five period of Gastrodia elata80.940
SRR5643514five period of Gastrodia elata106.320
SRR5643515five period of Gastrodia elata96.170
SRR5643524five period of Gastrodia elata97.870
SRR5643525five period of Gastrodia elata75.150
SRR5643528five period of Gastrodia elata94.160
SRR5643658five period of Gastrodia elata67.790
SRR5643659five period of Gastrodia elata67.330
SRR5643660five period of Gastrodia elata64.750
SRR5643661five period of Gastrodia elata65.820
SRR5643662five period of Gastrodia elata71.500
SRR5643663five period of Gastrodia elata72.620
SRR5643664five period of Gastrodia elata61.180
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1111.630
SRR6049655Rhizomagastrodiae_C368-T10_good_1152.300
SRR6049656Rhizomagastrodiae_C368-T07_good_1119.960
SRR6049657Rhizomagastrodiae_C368-T07_good_194.150
SRR6049658Rhizomagastrodiae_C368-T04_good_1131.950
SRR6049659Rhizomagastrodiae_C368-T04_good_1121.590
SRR6049660Rhizomagastrodiae_C368-T01_good_193.070
SRR6049661Rhizomagastrodiae_C368-T04_good_1110.020
SRR6049662Rhizomagastrodiae_C368-T01_good_1128.890
SRR6049663Rhizomagastrodiae_C368-T01_good_1136.460
SRR6049664Rhizomagastrodiae_C368-T10_good_1206.650
SRR6049665Rhizomagastrodiae_C368-T10_good_1206.650
SRP279888GastroGastrodia elata tuber 112.46
JuvenJuvenile tuber164.63
Mother_GastroMother tuber of Gastrodia elata 197.75
Mother_JuvenMother tuber of Juvenile 205.37