Detail information of GWHGAAEX016008/evm.TU.scaffold_72.38
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|434391665|ref|YP_007126612.1| | 6.00E-39 | Unspecific monooxygenase [Gloeocapsa sp. PCC 7428] |
| KOG | KOG0156 | 1.00E-129 | Cytochrome P450 CYP2 subfamily |
| nr | gi|743763118|ref|XP_010911323.1| | 0 | PREDICTED: cytochrome P450 71A1-like [Elaeis guineensis] |
| Swissprot | tr|P24465|C71A1_PERAE | 2.00E-143 | Cytochrome P450 71A1 |
| trEMBL | tr|I6LM44|I6LM44_ELAGV | 5.00E-157 | P450 {ECO:0000313|EMBL:ADM88550.1} |
| TAIR | AT3G26330 | 1.00E-129 | cytochrome P450, family 71, subfamily B, polypeptide 37 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000071 | 1722932 | 1728137 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX016008
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module8 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00067.21 | p450 | 38 | 497 | 9.50E-104 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Cytochrome P450 Family | CYP71A25 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0020037 | Molecular Function | heme binding |
| GO:0016705 | Molecular Function | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
| GO:0005506 | Molecular Function | iron ion binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 499.260 |
| SRR2545915 | Juvenile tuber | 243.390 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 8.750 |
| SRR5643514 | five period of Gastrodia elata | 23.230 | |
| SRR5643515 | five period of Gastrodia elata | 10.370 | |
| SRR5643524 | five period of Gastrodia elata | 34.700 | |
| SRR5643525 | five period of Gastrodia elata | 3.060 | |
| SRR5643528 | five period of Gastrodia elata | 2.070 | |
| SRR5643658 | five period of Gastrodia elata | 0.080 | |
| SRR5643659 | five period of Gastrodia elata | 20.780 | |
| SRR5643660 | five period of Gastrodia elata | 17.360 | |
| SRR5643661 | five period of Gastrodia elata | 13.430 | |
| SRR5643662 | five period of Gastrodia elata | 9.050 | |
| SRR5643663 | five period of Gastrodia elata | 6.430 | |
| SRR5643664 | five period of Gastrodia elata | 7.930 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 28.960 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 17.990 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 35.420 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 26.530 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 19.420 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 16.300 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 28.450 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 34.140 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 37.310 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 37.820 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 24.100 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 24.100 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 10.14 |
| Juven | Juvenile tuber | 40.34 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 235.02 | |
| Mother_Juven | Mother tuber of Juvenile | 84.24 |