Detail information of GWHGAAEX016010/evm.TU.scaffold_72.41


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672187941|ref|XP_008813459.1|3.47E-92PREDICTED: protein YLS9-like [Phoenix dactylifera]
Swissprottr|Q9SJ52|YLS9_ARATH2.00E-21Protein YLS9
trEMBLtr|M0TW47|M0TW47_MUSAM2.00E-89Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P34450_001}
TAIRAT3G442201.00E-71Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007117671301768274-
Transcript Sequence

Network for GWHGAAEX016010

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03168.12LEA_2751781.60E-08
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms81.940
SRR2545915Juvenile tuber47.860
SRP108465SRR5643513five period of Gastrodia elata61.780
SRR5643514five period of Gastrodia elata64.250
SRR5643515five period of Gastrodia elata40.950
SRR5643524five period of Gastrodia elata53.850
SRR5643525five period of Gastrodia elata322.530
SRR5643528five period of Gastrodia elata187.880
SRR5643658five period of Gastrodia elata274.180
SRR5643659five period of Gastrodia elata94.110
SRR5643660five period of Gastrodia elata109.820
SRR5643661five period of Gastrodia elata106.840
SRR5643662five period of Gastrodia elata139.350
SRR5643663five period of Gastrodia elata118.470
SRR5643664five period of Gastrodia elata189.750
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_163.630
SRR6049655Rhizomagastrodiae_C368-T10_good_1122.870
SRR6049656Rhizomagastrodiae_C368-T07_good_182.940
SRR6049657Rhizomagastrodiae_C368-T07_good_184.070
SRR6049658Rhizomagastrodiae_C368-T04_good_185.810
SRR6049659Rhizomagastrodiae_C368-T04_good_187.220
SRR6049660Rhizomagastrodiae_C368-T01_good_171.440
SRR6049661Rhizomagastrodiae_C368-T04_good_164.410
SRR6049662Rhizomagastrodiae_C368-T01_good_155.100
SRR6049663Rhizomagastrodiae_C368-T01_good_174.170
SRR6049664Rhizomagastrodiae_C368-T10_good_165.800
SRR6049665Rhizomagastrodiae_C368-T10_good_165.800
SRP279888GastroGastrodia elata tuber 115.19
JuvenJuvenile tuber65.47
Mother_GastroMother tuber of Gastrodia elata 31.80
Mother_JuvenMother tuber of Juvenile 26.15