Detail information of GWHGAAEX016023/evm.TU.scaffold_72.55


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG32767.00E-70Uncharacterized conserved protein, contains YggU domain
nrgi|743806601|ref|XP_010927717.1|5.96E-159PREDICTED: UPF0235 protein At5g63440 isoform X1 [Elaeis guineensis]
Swissprottr|Q8GWQ6|Y6344_ARATH1.00E-154UPF0235 protein At5g63440
trEMBLtr|B8B588|B8B588_ORYSI4.00E-157Putative uncharacterized protein {ECO:0000313|EMBL:EEC81884.1}
TAIRAT5G63440_27.00E-70Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007120993582114904+
Transcript Sequence

Network for GWHGAAEX016023

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02594.15DUF1671442141.40E-16
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms28.410
SRR2545915Juvenile tuber27.530
SRP108465SRR5643513five period of Gastrodia elata31.180
SRR5643514five period of Gastrodia elata41.970
SRR5643515five period of Gastrodia elata35.300
SRR5643524five period of Gastrodia elata44.700
SRR5643525five period of Gastrodia elata40.540
SRR5643528five period of Gastrodia elata44.410
SRR5643658five period of Gastrodia elata45.050
SRR5643659five period of Gastrodia elata31.000
SRR5643660five period of Gastrodia elata33.370
SRR5643661five period of Gastrodia elata34.870
SRR5643662five period of Gastrodia elata34.510
SRR5643663five period of Gastrodia elata33.410
SRR5643664five period of Gastrodia elata32.520
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_125.070
SRR6049655Rhizomagastrodiae_C368-T10_good_126.910
SRR6049656Rhizomagastrodiae_C368-T07_good_130.990
SRR6049657Rhizomagastrodiae_C368-T07_good_121.320
SRR6049658Rhizomagastrodiae_C368-T04_good_125.480
SRR6049659Rhizomagastrodiae_C368-T04_good_119.920
SRR6049660Rhizomagastrodiae_C368-T01_good_123.180
SRR6049661Rhizomagastrodiae_C368-T04_good_122.370
SRR6049662Rhizomagastrodiae_C368-T01_good_129.390
SRR6049663Rhizomagastrodiae_C368-T01_good_126.660
SRR6049664Rhizomagastrodiae_C368-T10_good_137.120
SRR6049665Rhizomagastrodiae_C368-T10_good_137.120
SRP279888GastroGastrodia elata tuber 44.00
JuvenJuvenile tuber35.11
Mother_GastroMother tuber of Gastrodia elata 37.98
Mother_JuvenMother tuber of Juvenile 28.74