Detail information of GWHGAAEX016031/evm.TU.scaffold_72.63


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|51246123|ref|YP_066007.1|9.00E-60deoxycytidylate deaminase [Desulfotalea psychrophila LSv54]
KOGKOG31278.00E-64Deoxycytidylate deaminase
nrgi|645268324|ref|XP_008239476.1|1.17E-120PREDICTED: deoxycytidylate deaminase [Prunus mume]
trEMBLtr|D7SGY9|D7SGY9_VITVI1.00E-120Putative uncharacterized protein {ECO:0000313|EMBL:CBI15669.3}
TAIR72936768.00E-64Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007124257462488753-
Transcript Sequence

Network for GWHGAAEX016031

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00383.22dCMP_cyt_deam_1691851.80E-25
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01493comEB Metabolic pathways map01100
Pyrimidine metabolismmap00240

Gene Ontology

GO term OntologyName
GO:0008270Molecular Functionzinc ion binding
GO:0003824Molecular Functioncatalytic activity
GO:0016787Molecular Functionhydrolase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms8.570
SRR2545915Juvenile tuber7.880
SRP108465SRR5643513five period of Gastrodia elata17.090
SRR5643514five period of Gastrodia elata19.020
SRR5643515five period of Gastrodia elata15.680
SRR5643524five period of Gastrodia elata20.630
SRR5643525five period of Gastrodia elata26.240
SRR5643528five period of Gastrodia elata23.840
SRR5643658five period of Gastrodia elata24.700
SRR5643659five period of Gastrodia elata7.830
SRR5643660five period of Gastrodia elata5.630
SRR5643661five period of Gastrodia elata6.500
SRR5643662five period of Gastrodia elata4.760
SRR5643663five period of Gastrodia elata7.420
SRR5643664five period of Gastrodia elata6.580
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_113.620
SRR6049655Rhizomagastrodiae_C368-T10_good_123.040
SRR6049656Rhizomagastrodiae_C368-T07_good_116.210
SRR6049657Rhizomagastrodiae_C368-T07_good_111.590
SRR6049658Rhizomagastrodiae_C368-T04_good_110.200
SRR6049659Rhizomagastrodiae_C368-T04_good_17.930
SRR6049660Rhizomagastrodiae_C368-T01_good_110.520
SRR6049661Rhizomagastrodiae_C368-T04_good_111.640
SRR6049662Rhizomagastrodiae_C368-T01_good_118.070
SRR6049663Rhizomagastrodiae_C368-T01_good_114.050
SRR6049664Rhizomagastrodiae_C368-T10_good_123.510
SRR6049665Rhizomagastrodiae_C368-T10_good_123.510
SRP279888GastroGastrodia elata tuber 3.36
JuvenJuvenile tuber7.77
Mother_GastroMother tuber of Gastrodia elata 4.13
Mother_JuvenMother tuber of Juvenile 5.02