Detail information of GWHGAAEX016033/evm.TU.scaffold_72.67


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG21042.00E-69Nuclear transport factor 2
nrgi|672158387|ref|XP_008798933.1|1.20E-72PREDICTED: nuclear transport factor 2-like [Phoenix dactylifera]
Swissprottr|Q9C7F5|NTF2_ARATH7.00E-70Nuclear transport factor 2
trEMBLtr|B3TLR5|B3TLR5_ELAGV1.00E-71Nuclear transport factor 2 {ECO:0000313|EMBL:ACF06496.1}
TAIRAT1G279702.00E-69nuclear transport factor 2B

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007125888602594541+
Transcript Sequence

Network for GWHGAAEX016033

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02136.19NTF261204.80E-33
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms45.190
SRR2545915Juvenile tuber54.340
SRP108465SRR5643513five period of Gastrodia elata89.520
SRR5643514five period of Gastrodia elata97.670
SRR5643515five period of Gastrodia elata92.940
SRR5643524five period of Gastrodia elata89.710
SRR5643525five period of Gastrodia elata225.590
SRR5643528five period of Gastrodia elata218.170
SRR5643658five period of Gastrodia elata242.950
SRR5643659five period of Gastrodia elata109.480
SRR5643660five period of Gastrodia elata109.250
SRR5643661five period of Gastrodia elata118.110
SRR5643662five period of Gastrodia elata105.150
SRR5643663five period of Gastrodia elata105.100
SRR5643664five period of Gastrodia elata102.880
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_187.280
SRR6049655Rhizomagastrodiae_C368-T10_good_1137.870
SRR6049656Rhizomagastrodiae_C368-T07_good_1108.970
SRR6049657Rhizomagastrodiae_C368-T07_good_196.300
SRR6049658Rhizomagastrodiae_C368-T04_good_181.450
SRR6049659Rhizomagastrodiae_C368-T04_good_194.400
SRR6049660Rhizomagastrodiae_C368-T01_good_194.250
SRR6049661Rhizomagastrodiae_C368-T04_good_186.210
SRR6049662Rhizomagastrodiae_C368-T01_good_1109.840
SRR6049663Rhizomagastrodiae_C368-T01_good_197.920
SRR6049664Rhizomagastrodiae_C368-T10_good_1119.270
SRR6049665Rhizomagastrodiae_C368-T10_good_1119.270
SRP279888GastroGastrodia elata tuber 145.67
JuvenJuvenile tuber106.78
Mother_GastroMother tuber of Gastrodia elata 101.59
Mother_JuvenMother tuber of Juvenile 65.00