Detail information of GWHGAAEX016036/evm.TU.scaffold_72.71


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743813016|ref|XP_010929597.1|1.36E-15PREDICTED: regulation of nuclear pre-mRNA domain-containing protein 1B [Elaeis guineensis]
trEMBLtr|M0RQH8|M0RQH8_MUSAM7.00E-13Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P08480_001}

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007127093032710124+
Transcript Sequence

Network for GWHGAAEX016036

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms11.420
SRR2545915Juvenile tuber12.620
SRP108465SRR5643513five period of Gastrodia elata15.420
SRR5643514five period of Gastrodia elata17.280
SRR5643515five period of Gastrodia elata16.100
SRR5643524five period of Gastrodia elata14.700
SRR5643525five period of Gastrodia elata17.390
SRR5643528five period of Gastrodia elata22.470
SRR5643658five period of Gastrodia elata21.120
SRR5643659five period of Gastrodia elata18.050
SRR5643660five period of Gastrodia elata18.200
SRR5643661five period of Gastrodia elata19.420
SRR5643662five period of Gastrodia elata17.560
SRR5643663five period of Gastrodia elata16.930
SRR5643664five period of Gastrodia elata18.540
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_124.560
SRR6049655Rhizomagastrodiae_C368-T10_good_150.620
SRR6049656Rhizomagastrodiae_C368-T07_good_123.600
SRR6049657Rhizomagastrodiae_C368-T07_good_129.300
SRR6049658Rhizomagastrodiae_C368-T04_good_131.090
SRR6049659Rhizomagastrodiae_C368-T04_good_139.520
SRR6049660Rhizomagastrodiae_C368-T01_good_136.250
SRR6049661Rhizomagastrodiae_C368-T04_good_131.200
SRR6049662Rhizomagastrodiae_C368-T01_good_120.690
SRR6049663Rhizomagastrodiae_C368-T01_good_123.630
SRR6049664Rhizomagastrodiae_C368-T10_good_125.270
SRR6049665Rhizomagastrodiae_C368-T10_good_125.270
SRP279888GastroGastrodia elata tuber 19.84
JuvenJuvenile tuber22.11
Mother_GastroMother tuber of Gastrodia elata 21.47
Mother_JuvenMother tuber of Juvenile 27.26