Detail information of GWHGAAEX016037/evm.TU.scaffold_72.72


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG26695.00E-103Regulator of nuclear mRNA
nrgi|743813016|ref|XP_010929597.1|1.89E-151PREDICTED: regulation of nuclear pre-mRNA domain-containing protein 1B [Elaeis guineensis]
trEMBLtr|A0A061ED57|A0A061ED57_THECC3.00E-137ENTH/VHS family protein isoform 2 {ECO:0000313|EMBL:EOY02866.1}
TAIRAT3G269905.00E-103ENTH/VHS family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007127489332790667+
Transcript Sequence

Network for GWHGAAEX016037

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04818.12CTD_bind611226.30E-18
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms18.180
SRR2545915Juvenile tuber15.220
SRP108465SRR5643513five period of Gastrodia elata21.230
SRR5643514five period of Gastrodia elata23.510
SRR5643515five period of Gastrodia elata19.280
SRR5643524five period of Gastrodia elata21.660
SRR5643525five period of Gastrodia elata23.610
SRR5643528five period of Gastrodia elata22.420
SRR5643658five period of Gastrodia elata28.950
SRR5643659five period of Gastrodia elata20.870
SRR5643660five period of Gastrodia elata16.790
SRR5643661five period of Gastrodia elata17.920
SRR5643662five period of Gastrodia elata22.310
SRR5643663five period of Gastrodia elata23.140
SRR5643664five period of Gastrodia elata22.140
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_130.030
SRR6049655Rhizomagastrodiae_C368-T10_good_134.660
SRR6049656Rhizomagastrodiae_C368-T07_good_122.750
SRR6049657Rhizomagastrodiae_C368-T07_good_128.810
SRR6049658Rhizomagastrodiae_C368-T04_good_129.620
SRR6049659Rhizomagastrodiae_C368-T04_good_121.850
SRR6049660Rhizomagastrodiae_C368-T01_good_127.300
SRR6049661Rhizomagastrodiae_C368-T04_good_131.500
SRR6049662Rhizomagastrodiae_C368-T01_good_125.820
SRR6049663Rhizomagastrodiae_C368-T01_good_125.310
SRR6049664Rhizomagastrodiae_C368-T10_good_128.250
SRR6049665Rhizomagastrodiae_C368-T10_good_128.250
SRP279888GastroGastrodia elata tuber 22.55
JuvenJuvenile tuber22.62
Mother_GastroMother tuber of Gastrodia elata 22.64
Mother_JuvenMother tuber of Juvenile 19.23