Detail information of GWHGAAEX016056/evm.TU.scaffold_72.91


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|330813456|ref|YP_004357695.1|2.00E-53dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex [Candidatus Pelagibacter sp. IMCC9063]
KOGKOG05597.00E-79Dihydrolipoamide succinyltransferase (2-oxoglutarate dehydrogenase, E2 subunit)
nrgi|629112279|gb|KCW77239.1|4.32E-85hypothetical protein EUGRSUZ_D01602 [Eucalyptus grandis]
Swissprottr|Q9FLQ4|ODO2A_ARATH2.00E-79Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 1, mitochondrial (Precursor)
trEMBLtr|A0A059CG55|A0A059CG55_EUCGR2.00E-85Uncharacterized protein {ECO:0000313|EMBL:KCW77239.1}
TAIRAT5G550707.00E-79Dihydrolipoamide succinyltransferase

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007133167363322187-
Transcript Sequence

Network for GWHGAAEX016056

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00198.222-oxoacid_dh992597.80E-43
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00658DLST, sucB Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Biosynthesis of antibioticsmap01130
Carbon metabolismmap01200
Citrate cycle (TCA cycle)map00020
Lysine degradationmap00310
Tryptophan metabolismmap00380

Gene Ontology

GO term OntologyName
GO:0016746Molecular Functiontransferase activity, transferring acyl groups

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.000
SRR2545915Juvenile tuber0.130
SRP108465SRR5643513five period of Gastrodia elata0.610
SRR5643514five period of Gastrodia elata0.550
SRR5643515five period of Gastrodia elata0.230
SRR5643524five period of Gastrodia elata0.400
SRR5643525five period of Gastrodia elata0.000
SRR5643528five period of Gastrodia elata0.000
SRR5643658five period of Gastrodia elata0.000
SRR5643659five period of Gastrodia elata0.200
SRR5643660five period of Gastrodia elata0.000
SRR5643661five period of Gastrodia elata0.000
SRR5643662five period of Gastrodia elata0.000
SRR5643663five period of Gastrodia elata0.250
SRR5643664five period of Gastrodia elata0.200
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.450
SRR6049655Rhizomagastrodiae_C368-T10_good_10.130
SRR6049656Rhizomagastrodiae_C368-T07_good_10.090
SRR6049657Rhizomagastrodiae_C368-T07_good_10.080
SRR6049658Rhizomagastrodiae_C368-T04_good_10.320
SRR6049659Rhizomagastrodiae_C368-T04_good_10.130
SRR6049660Rhizomagastrodiae_C368-T01_good_10.000
SRR6049661Rhizomagastrodiae_C368-T04_good_10.000
SRR6049662Rhizomagastrodiae_C368-T01_good_10.000
SRR6049663Rhizomagastrodiae_C368-T01_good_10.170
SRR6049664Rhizomagastrodiae_C368-T10_good_10.300
SRR6049665Rhizomagastrodiae_C368-T10_good_10.300
SRP279888GastroGastrodia elata tuber 0.00
JuvenJuvenile tuber0.26
Mother_GastroMother tuber of Gastrodia elata 0.20
Mother_JuvenMother tuber of Juvenile 1.13