Detail information of GWHGAAEX016064/evm.TU.scaffold_72.100
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|119385316|ref|YP_916372.1| | 4.00E-74 | 3-demethylubiquinone-9 3-methyltransferase [Paracoccus denitrificans PD1222] |
| KOG | KOG1270 | 3.00E-117 | Methyltransferases |
| nr | gi|695057594|ref|XP_009417079.1| | 4.05E-138 | PREDICTED: hexaprenyldihydroxybenzoate methyltransferase, mitochondrial [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|O49354|COQ3_ARATH | 7.00E-118 | Hexaprenyldihydroxybenzoate methyltransferase, mitochondrial (Precursor) |
| trEMBL | tr|M0TZ52|M0TZ52_MUSAM | 2.00E-138 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P10430_001} |
| TAIR | AT2G30920 | 3.00E-117 | coenzyme Q 3 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000071 | 3485694 | 3531779 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX016064
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF08241.11 | Methyltransf_11 | 145 | 241 | 3.60E-17 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00591 | COQ3 | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Ubiquinone and other terpenoid-quinone biosynthesis | map00130 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006744 | Biological Process | ubiquinone biosynthetic process |
| GO:0008168 | Molecular Function | methyltransferase activity |
| GO:0008425 | Molecular Function | 2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 25.650 |
| SRR2545915 | Juvenile tuber | 34.140 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 13.080 |
| SRR5643514 | five period of Gastrodia elata | 15.200 | |
| SRR5643515 | five period of Gastrodia elata | 13.490 | |
| SRR5643524 | five period of Gastrodia elata | 13.800 | |
| SRR5643525 | five period of Gastrodia elata | 14.540 | |
| SRR5643528 | five period of Gastrodia elata | 13.600 | |
| SRR5643658 | five period of Gastrodia elata | 11.530 | |
| SRR5643659 | five period of Gastrodia elata | 10.510 | |
| SRR5643660 | five period of Gastrodia elata | 10.560 | |
| SRR5643661 | five period of Gastrodia elata | 11.580 | |
| SRR5643662 | five period of Gastrodia elata | 8.680 | |
| SRR5643663 | five period of Gastrodia elata | 9.100 | |
| SRR5643664 | five period of Gastrodia elata | 9.190 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 13.520 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 9.590 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 21.470 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 14.070 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 18.460 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 18.910 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 19.010 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 21.720 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 20.190 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 16.430 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 16.180 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 16.180 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 9.11 |
| Juven | Juvenile tuber | 5.93 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 8.26 | |
| Mother_Juven | Mother tuber of Juvenile | 4.12 |