Detail information of GWHGAAEX016066/CADD01277.1.gene


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|514786668|ref|XP_004971144.1|1.73E-25PREDICTED: uncharacterized protein LOC101757203 isoform X2 [Setaria italica]
trEMBLtr|K3XN17|K3XN17_SETIT6.00E-26Uncharacterized protein {ECO:0000313|EnsemblPlants:Si003290m}

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007136868193688450+
Transcript Sequence

Network for GWHGAAEX016066

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module3

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00403.25HMA771211.80E-09
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0030001Biological Processmetal ion transport
GO:0046872Molecular Functionmetal ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms10.710
SRR2545915Juvenile tuber19.680
SRP108465SRR5643513five period of Gastrodia elata4.990
SRR5643514five period of Gastrodia elata2.810
SRR5643515five period of Gastrodia elata3.870
SRR5643524five period of Gastrodia elata5.000
SRR5643525five period of Gastrodia elata22.750
SRR5643528five period of Gastrodia elata1.690
SRR5643658five period of Gastrodia elata2.750
SRR5643659five period of Gastrodia elata49.600
SRR5643660five period of Gastrodia elata26.390
SRR5643661five period of Gastrodia elata52.650
SRR5643662five period of Gastrodia elata54.170
SRR5643663five period of Gastrodia elata62.390
SRR5643664five period of Gastrodia elata61.610
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11.040
SRR6049655Rhizomagastrodiae_C368-T10_good_15.050
SRR6049656Rhizomagastrodiae_C368-T07_good_11.290
SRR6049657Rhizomagastrodiae_C368-T07_good_10.590
SRR6049658Rhizomagastrodiae_C368-T04_good_10.370
SRR6049659Rhizomagastrodiae_C368-T04_good_10.000
SRR6049660Rhizomagastrodiae_C368-T01_good_10.220
SRR6049661Rhizomagastrodiae_C368-T04_good_10.000
SRR6049662Rhizomagastrodiae_C368-T01_good_10.300
SRR6049663Rhizomagastrodiae_C368-T01_good_10.590
SRR6049664Rhizomagastrodiae_C368-T10_good_11.970
SRR6049665Rhizomagastrodiae_C368-T10_good_11.970
SRP279888GastroGastrodia elata tuber 19.54
JuvenJuvenile tuber19.66
Mother_GastroMother tuber of Gastrodia elata 5.26
Mother_JuvenMother tuber of Juvenile 19.94