Detail information of GWHGAAEX016067/evm.TU.scaffold_72.102


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG23183.00E-130Uncharacterized conserved protein
nrgi|672126407|ref|XP_008786653.1|0PREDICTED: pre-rRNA-processing protein esf1-like [Phoenix dactylifera]
trEMBLtr|M0SCR6|M0SCR6_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P07990_001}
TAIRAT3G011603.00E-130Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007137470823790908+
Transcript Sequence

Network for GWHGAAEX016067

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08159.11NUC1536246479.10E-11
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005634Cellular Componentnucleus

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms51.190
SRR2545915Juvenile tuber46.400
SRP108465SRR5643513five period of Gastrodia elata16.690
SRR5643514five period of Gastrodia elata17.860
SRR5643515five period of Gastrodia elata15.140
SRR5643524five period of Gastrodia elata15.980
SRR5643525five period of Gastrodia elata14.800
SRR5643528five period of Gastrodia elata14.240
SRR5643658five period of Gastrodia elata11.640
SRR5643659five period of Gastrodia elata28.970
SRR5643660five period of Gastrodia elata32.070
SRR5643661five period of Gastrodia elata28.450
SRR5643662five period of Gastrodia elata27.190
SRR5643663five period of Gastrodia elata26.790
SRR5643664five period of Gastrodia elata27.100
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_120.920
SRR6049655Rhizomagastrodiae_C368-T10_good_118.740
SRR6049656Rhizomagastrodiae_C368-T07_good_118.370
SRR6049657Rhizomagastrodiae_C368-T07_good_119.360
SRR6049658Rhizomagastrodiae_C368-T04_good_118.100
SRR6049659Rhizomagastrodiae_C368-T04_good_119.740
SRR6049660Rhizomagastrodiae_C368-T01_good_120.760
SRR6049661Rhizomagastrodiae_C368-T04_good_116.640
SRR6049662Rhizomagastrodiae_C368-T01_good_121.870
SRR6049663Rhizomagastrodiae_C368-T01_good_120.580
SRR6049664Rhizomagastrodiae_C368-T10_good_120.890
SRR6049665Rhizomagastrodiae_C368-T10_good_120.890
SRP279888GastroGastrodia elata tuber 25.38
JuvenJuvenile tuber32.74
Mother_GastroMother tuber of Gastrodia elata 6.40
Mother_JuvenMother tuber of Juvenile 15.22