Detail information of GWHGAAEX016071/evm.TU.scaffold_72.107


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG47092.00E-15Uncharacterized conserved protein
nrgi|743785465|ref|XP_010921912.1|1.48E-45PREDICTED: ribosomal RNA-processing protein 17 [Elaeis guineensis]
trEMBLtr|K4AET5|K4AET5_SETIT7.00E-37Uncharacterized protein {ECO:0000313|EnsemblPlants:Si037392m}
TAIRAT1G112402.00E-15Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007139721693978890-
Transcript Sequence

Network for GWHGAAEX016071

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF09805.8Nop25231207.00E-18
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms47.560
SRR2545915Juvenile tuber45.900
SRP108465SRR5643513five period of Gastrodia elata28.910
SRR5643514five period of Gastrodia elata26.020
SRR5643515five period of Gastrodia elata28.830
SRR5643524five period of Gastrodia elata27.580
SRR5643525five period of Gastrodia elata29.710
SRR5643528five period of Gastrodia elata30.780
SRR5643658five period of Gastrodia elata31.510
SRR5643659five period of Gastrodia elata37.540
SRR5643660five period of Gastrodia elata44.130
SRR5643661five period of Gastrodia elata39.900
SRR5643662five period of Gastrodia elata46.820
SRR5643663five period of Gastrodia elata43.920
SRR5643664five period of Gastrodia elata42.320
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_128.890
SRR6049655Rhizomagastrodiae_C368-T10_good_131.570
SRR6049656Rhizomagastrodiae_C368-T07_good_129.810
SRR6049657Rhizomagastrodiae_C368-T07_good_138.290
SRR6049658Rhizomagastrodiae_C368-T04_good_137.470
SRR6049659Rhizomagastrodiae_C368-T04_good_141.970
SRR6049660Rhizomagastrodiae_C368-T01_good_133.230
SRR6049661Rhizomagastrodiae_C368-T04_good_130.530
SRR6049662Rhizomagastrodiae_C368-T01_good_124.340
SRR6049663Rhizomagastrodiae_C368-T01_good_126.730
SRR6049664Rhizomagastrodiae_C368-T10_good_128.190
SRR6049665Rhizomagastrodiae_C368-T10_good_128.190
SRP279888GastroGastrodia elata tuber 47.18
JuvenJuvenile tuber31.20
Mother_GastroMother tuber of Gastrodia elata 43.74
Mother_JuvenMother tuber of Juvenile 44.06