Detail information of GWHGAAEX016077/evm.TU.scaffold_72.114


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|530780481|ref|YP_008432288.1|1.00E-124thermosome subunit [Thermofilum sp. 1910b]
KOGKOG03610Chaperonin complex component, TCP-1 eta subunit (CCT7)
nrgi|720034931|ref|XP_010266878.1|0PREDICTED: T-complex protein 1 subunit eta-like [Nelumbo nucifera]
Swissprottr|Q9SF16|TCPH_ARATH0T-complex protein 1 subunit eta {ECO:0000303|PubMed:11599560}
trEMBLtr|M0TR12|M0TR12_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P16590_001}
TAIRAT3G118300TCP-1/cpn60 chaperonin family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007141544634176426-
Transcript Sequence

Network for GWHGAAEX016077

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module9

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00118.23Cpn60_TCP1355263.10E-157
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006457Biological Processprotein folding
GO:0005524Molecular FunctionATP binding
GO:0051082Molecular Functionunfolded protein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms85.470
SRR2545915Juvenile tuber98.520
SRP108465SRR5643513five period of Gastrodia elata74.670
SRR5643514five period of Gastrodia elata79.460
SRR5643515five period of Gastrodia elata70.430
SRR5643524five period of Gastrodia elata74.700
SRR5643525five period of Gastrodia elata34.640
SRR5643528five period of Gastrodia elata32.480
SRR5643658five period of Gastrodia elata31.490
SRR5643659five period of Gastrodia elata90.360
SRR5643660five period of Gastrodia elata91.960
SRR5643661five period of Gastrodia elata90.310
SRR5643662five period of Gastrodia elata88.230
SRR5643663five period of Gastrodia elata86.620
SRR5643664five period of Gastrodia elata85.210
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1149.840
SRR6049655Rhizomagastrodiae_C368-T10_good_1112.520
SRR6049656Rhizomagastrodiae_C368-T07_good_1170.410
SRR6049657Rhizomagastrodiae_C368-T07_good_1172.850
SRR6049658Rhizomagastrodiae_C368-T04_good_1235.200
SRR6049659Rhizomagastrodiae_C368-T04_good_1260.090
SRR6049660Rhizomagastrodiae_C368-T01_good_1191.070
SRR6049661Rhizomagastrodiae_C368-T04_good_1219.140
SRR6049662Rhizomagastrodiae_C368-T01_good_1187.880
SRR6049663Rhizomagastrodiae_C368-T01_good_1214.260
SRR6049664Rhizomagastrodiae_C368-T10_good_1134.770
SRR6049665Rhizomagastrodiae_C368-T10_good_1134.770
SRP279888GastroGastrodia elata tuber 258.90
JuvenJuvenile tuber129.43
Mother_GastroMother tuber of Gastrodia elata 59.10
Mother_JuvenMother tuber of Juvenile 62.00