Detail information of GWHGAAEX016081/evm.TU.scaffold_72.119


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG47415.00E-27Uncharacterized conserved protein
nrgi|672111544|ref|XP_008801216.1|1.15E-68PREDICTED: ubiquitin-like-conjugating enzyme ATG10 [Phoenix dactylifera]
Swissprottr|Q8VZ52|ATG10_ARATH4.00E-55Ubiquitin-like-conjugating enzyme ATG10
trEMBLtr|I1H8U5|I1H8U5_BRADI1.00E-65Uncharacterized protein {ECO:0000313|EnsemblPlants:BRADI1G72130.1}
TAIRHS185944965.00E-27Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007142702624275277-
Transcript Sequence

Network for GWHGAAEX016081

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03987.14Autophagy_act_C1021681.90E-18
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K17888ATG10L, ATG10 Autophagy - animal map04140
Autophagy - yeastmap04138
Autophagy - othermap04136

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms66.030
SRR2545915Juvenile tuber36.630
SRP108465SRR5643513five period of Gastrodia elata20.320
SRR5643514five period of Gastrodia elata14.540
SRR5643515five period of Gastrodia elata16.320
SRR5643524five period of Gastrodia elata12.490
SRR5643525five period of Gastrodia elata31.070
SRR5643528five period of Gastrodia elata24.130
SRR5643658five period of Gastrodia elata33.530
SRR5643659five period of Gastrodia elata14.490
SRR5643660five period of Gastrodia elata21.330
SRR5643661five period of Gastrodia elata18.930
SRR5643662five period of Gastrodia elata17.470
SRR5643663five period of Gastrodia elata19.300
SRR5643664five period of Gastrodia elata21.450
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_136.390
SRR6049655Rhizomagastrodiae_C368-T10_good_148.970
SRR6049656Rhizomagastrodiae_C368-T07_good_135.370
SRR6049657Rhizomagastrodiae_C368-T07_good_148.510
SRR6049658Rhizomagastrodiae_C368-T04_good_153.190
SRR6049659Rhizomagastrodiae_C368-T04_good_165.300
SRR6049660Rhizomagastrodiae_C368-T01_good_137.950
SRR6049661Rhizomagastrodiae_C368-T04_good_147.420
SRR6049662Rhizomagastrodiae_C368-T01_good_130.440
SRR6049663Rhizomagastrodiae_C368-T01_good_130.890
SRR6049664Rhizomagastrodiae_C368-T10_good_129.480
SRR6049665Rhizomagastrodiae_C368-T10_good_129.480
SRP279888GastroGastrodia elata tuber 42.58
JuvenJuvenile tuber44.41
Mother_GastroMother tuber of Gastrodia elata 39.05
Mother_JuvenMother tuber of Juvenile 54.74