Detail information of GWHGAAEX016083/evm.TU.scaffold_72.121


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672161544|ref|XP_008800593.1|2.91E-58PREDICTED: auxin-responsive protein IAA10-like [Phoenix dactylifera]
Swissprottr|Q0DWF2|IAA10_ORYSJ1.00E-51Auxin-responsive protein IAA10
trEMBLtr|M0RNR1|M0RNR1_MUSAM1.00E-51Auxin-responsive protein {ECO:0000256|RuleBase:RU004549}
TAIRAT1G045505.00E-45AUX/IAA transcriptional regulator family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007143712354391704+
Transcript Sequence

Network for GWHGAAEX016083

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module12

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02309.15AUX_IAA682387.90E-48
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyAUX/IAA

KEGG pathway

KO Enzyme pathway mapID
K14484IAA Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.620
SRR2545915Juvenile tuber1.250
SRP108465SRR5643513five period of Gastrodia elata5.720
SRR5643514five period of Gastrodia elata5.720
SRR5643515five period of Gastrodia elata5.160
SRR5643524five period of Gastrodia elata6.340
SRR5643525five period of Gastrodia elata2.070
SRR5643528five period of Gastrodia elata6.370
SRR5643658five period of Gastrodia elata8.170
SRR5643659five period of Gastrodia elata2.890
SRR5643660five period of Gastrodia elata1.430
SRR5643661five period of Gastrodia elata0.870
SRR5643662five period of Gastrodia elata0.740
SRR5643663five period of Gastrodia elata0.700
SRR5643664five period of Gastrodia elata0.480
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_14.590
SRR6049655Rhizomagastrodiae_C368-T10_good_13.150
SRR6049656Rhizomagastrodiae_C368-T07_good_12.920
SRR6049657Rhizomagastrodiae_C368-T07_good_13.130
SRR6049658Rhizomagastrodiae_C368-T04_good_15.110
SRR6049659Rhizomagastrodiae_C368-T04_good_15.960
SRR6049660Rhizomagastrodiae_C368-T01_good_13.360
SRR6049661Rhizomagastrodiae_C368-T04_good_15.360
SRR6049662Rhizomagastrodiae_C368-T01_good_15.720
SRR6049663Rhizomagastrodiae_C368-T01_good_15.890
SRR6049664Rhizomagastrodiae_C368-T10_good_17.850
SRR6049665Rhizomagastrodiae_C368-T10_good_17.850
SRP279888GastroGastrodia elata tuber 2.60
JuvenJuvenile tuber1.73
Mother_GastroMother tuber of Gastrodia elata 25.26
Mother_JuvenMother tuber of Juvenile 3.72