Detail information of GWHGAAEX016086/evm.TU.scaffold_72.124


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG41981.00E-91RNA-binding Ran Zn-finger protein and related proteins
nrgi|720087263|ref|XP_010244096.1|1.41E-142PREDICTED: uncharacterized protein LOC104588005 isoform X1 [Nelumbo nucifera]
trEMBLtr|D7SP05|D7SP05_VITVI2.00E-127Putative uncharacterized protein {ECO:0000313|EMBL:CBI17384.3}
TAIRAT2G179751.00E-91zinc finger (Ran-binding) family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007144160144453222-
Transcript Sequence

Network for GWHGAAEX016086

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00641.17zf-RanBP5324.30E-06
PF00641.17zf-RanBP48761.30E-05
PF00641.17zf-RanBP2983268.60E-09
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms51.990
SRR2545915Juvenile tuber44.300
SRP108465SRR5643513five period of Gastrodia elata35.970
SRR5643514five period of Gastrodia elata34.800
SRR5643515five period of Gastrodia elata32.840
SRR5643524five period of Gastrodia elata39.380
SRR5643525five period of Gastrodia elata41.270
SRR5643528five period of Gastrodia elata41.090
SRR5643658five period of Gastrodia elata37.440
SRR5643659five period of Gastrodia elata40.000
SRR5643660five period of Gastrodia elata41.140
SRR5643661five period of Gastrodia elata43.340
SRR5643662five period of Gastrodia elata39.060
SRR5643663five period of Gastrodia elata40.210
SRR5643664five period of Gastrodia elata40.220
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_141.350
SRR6049655Rhizomagastrodiae_C368-T10_good_139.720
SRR6049656Rhizomagastrodiae_C368-T07_good_141.120
SRR6049657Rhizomagastrodiae_C368-T07_good_153.390
SRR6049658Rhizomagastrodiae_C368-T04_good_149.020
SRR6049659Rhizomagastrodiae_C368-T04_good_153.230
SRR6049660Rhizomagastrodiae_C368-T01_good_150.150
SRR6049661Rhizomagastrodiae_C368-T04_good_146.490
SRR6049662Rhizomagastrodiae_C368-T01_good_141.360
SRR6049663Rhizomagastrodiae_C368-T01_good_138.520
SRR6049664Rhizomagastrodiae_C368-T10_good_143.290
SRR6049665Rhizomagastrodiae_C368-T10_good_143.290
SRP279888GastroGastrodia elata tuber 59.71
JuvenJuvenile tuber75.85
Mother_GastroMother tuber of Gastrodia elata 54.01
Mother_JuvenMother tuber of Juvenile 57.50