Detail information of GWHGAAEX016093/evm.TU.scaffold_722.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|209695922|ref|YP_002263852.1|1.00E-08ABC transporter ATP-binding protein [Aliivibrio salmonicida LFI1238]
KOGKOG00611.00E-20Transporter, ABC superfamily (Breast cancer resistance protein)
nrgi|697183502|ref|XP_009600777.1|1.05E-28PREDICTED: ABC transporter G family member 11-like, partial [Nicotiana tomentosiformis]
Swissprottr|Q9C8K2|AB12G_ARATH3.00E-21ABC transporter G family member 12
trEMBLtr|F6HD74|F6HD74_VITVI6.00E-28Putative uncharacterized protein {ECO:0000313|EMBL:CCB50169.1}
TAIRAT1G515001.00E-20ABC-2 type transporter family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000007141076411501+
Transcript Sequence

Network for GWHGAAEX016093

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00005.26ABC_tran30731.40E-08
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016887Molecular FunctionATPase activity
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms3.580
SRR2545915Juvenile tuber0.000
SRP108465SRR5643513five period of Gastrodia elata95.010
SRR5643514five period of Gastrodia elata39.280
SRR5643515five period of Gastrodia elata43.590
SRR5643524five period of Gastrodia elata38.130
SRR5643525five period of Gastrodia elata4.070
SRR5643528five period of Gastrodia elata0.000
SRR5643658five period of Gastrodia elata6.460
SRR5643659five period of Gastrodia elata1.430
SRR5643660five period of Gastrodia elata0.000
SRR5643661five period of Gastrodia elata6.630
SRR5643662five period of Gastrodia elata1.970
SRR5643663five period of Gastrodia elata2.560
SRR5643664five period of Gastrodia elata0.000
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1124.980
SRR6049655Rhizomagastrodiae_C368-T10_good_1153.980
SRR6049656Rhizomagastrodiae_C368-T07_good_1243.230
SRR6049657Rhizomagastrodiae_C368-T07_good_156.770
SRR6049658Rhizomagastrodiae_C368-T04_good_145.300
SRR6049659Rhizomagastrodiae_C368-T04_good_172.300
SRR6049660Rhizomagastrodiae_C368-T01_good_149.330
SRR6049661Rhizomagastrodiae_C368-T04_good_155.520
SRR6049662Rhizomagastrodiae_C368-T01_good_1133.530
SRR6049663Rhizomagastrodiae_C368-T01_good_1167.990
SRR6049664Rhizomagastrodiae_C368-T10_good_1259.380
SRR6049665Rhizomagastrodiae_C368-T10_good_1259.380
SRP279888GastroGastrodia elata tuber 10.07
JuvenJuvenile tuber100.88
Mother_GastroMother tuber of Gastrodia elata 50.45
Mother_JuvenMother tuber of Juvenile 69.11