Detail information of GWHGAAEX016096/evm.TU.scaffold_73.7


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|430742304|ref|YP_007201433.1|5.00E-29protein kinase family protein [Singulisphaera acidiphila DSM 18658]
KOGKOG11870Serine/threonine protein kinase
nrgi|590645042|ref|XP_007031244.1|0Interleukin-1 receptor-associated kinase, putative isoform 1 [Theobroma cacao]
Swissprottr|Q9SJG2|Y2296_ARATH0Probable receptor-like protein kinase At2g42960
trEMBLtr|A0A061F3Z3|A0A061F3Z3_THECC0Interleukin-1 receptor-associated kinase, putative isoform 1 {ECO:0000313|EMBL:EOY11746.1}
TAIRAT1G567200Protein kinase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007672231121156+
Transcript Sequence

Network for GWHGAAEX016096

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase1944621.60E-46
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_RLCK-V

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms19.210
SRR2545915Juvenile tuber20.790
SRP108465SRR5643513five period of Gastrodia elata14.570
SRR5643514five period of Gastrodia elata13.540
SRR5643515five period of Gastrodia elata15.550
SRR5643524five period of Gastrodia elata14.820
SRR5643525five period of Gastrodia elata72.610
SRR5643528five period of Gastrodia elata57.410
SRR5643658five period of Gastrodia elata106.290
SRR5643659five period of Gastrodia elata15.930
SRR5643660five period of Gastrodia elata16.600
SRR5643661five period of Gastrodia elata17.180
SRR5643662five period of Gastrodia elata16.340
SRR5643663five period of Gastrodia elata18.410
SRR5643664five period of Gastrodia elata18.340
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_116.400
SRR6049655Rhizomagastrodiae_C368-T10_good_112.110
SRR6049656Rhizomagastrodiae_C368-T07_good_113.520
SRR6049657Rhizomagastrodiae_C368-T07_good_115.930
SRR6049658Rhizomagastrodiae_C368-T04_good_113.990
SRR6049659Rhizomagastrodiae_C368-T04_good_115.320
SRR6049660Rhizomagastrodiae_C368-T01_good_114.980
SRR6049661Rhizomagastrodiae_C368-T04_good_115.910
SRR6049662Rhizomagastrodiae_C368-T01_good_112.430
SRR6049663Rhizomagastrodiae_C368-T01_good_110.920
SRR6049664Rhizomagastrodiae_C368-T10_good_113.530
SRR6049665Rhizomagastrodiae_C368-T10_good_113.530
SRP279888GastroGastrodia elata tuber 17.98
JuvenJuvenile tuber14.99
Mother_GastroMother tuber of Gastrodia elata 14.84
Mother_JuvenMother tuber of Juvenile 13.25