Detail information of GWHGAAEX016097/evm.TU.scaffold_73.8


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|339484857|ref|YP_004696643.1|3.00E-21serine/threonine protein kinase [Nitrosomonas sp. Is79A3]
KOGKOG11870Serine/threonine protein kinase
nrgi|530279454|gb|AGT17267.1|0pto kinase interactor [Saccharum hybrid cultivar R570]
Swissprottr|Q41328|PTI1_SOLLC0Pto-interacting protein 1
trEMBLtr|A0A059Q0V0|A0A059Q0V0_9POAL0Pto kinase interactor {ECO:0000313|EMBL:AGT17267.1}
TAIRAT1G482100Protein kinase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000076126111146368-
Transcript Sequence

Network for GWHGAAEX016097

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07714.16Pkinase_Tyr543259.60E-44
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_RLCK-VIII

KEGG pathway

KO Enzyme pathway mapID
K13436PTI1 Plant-pathogen interaction map04626

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0005524Molecular FunctionATP binding
GO:0004672Molecular Functionprotein kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms168.280
SRR2545915Juvenile tuber145.990
SRP108465SRR5643513five period of Gastrodia elata99.550
SRR5643514five period of Gastrodia elata81.130
SRR5643515five period of Gastrodia elata99.920
SRR5643524five period of Gastrodia elata85.360
SRR5643525five period of Gastrodia elata193.880
SRR5643528five period of Gastrodia elata205.580
SRR5643658five period of Gastrodia elata199.580
SRR5643659five period of Gastrodia elata101.650
SRR5643660five period of Gastrodia elata115.290
SRR5643661five period of Gastrodia elata111.270
SRR5643662five period of Gastrodia elata143.140
SRR5643663five period of Gastrodia elata134.800
SRR5643664five period of Gastrodia elata149.450
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1133.370
SRR6049655Rhizomagastrodiae_C368-T10_good_1103.080
SRR6049656Rhizomagastrodiae_C368-T07_good_1137.620
SRR6049657Rhizomagastrodiae_C368-T07_good_1175.380
SRR6049658Rhizomagastrodiae_C368-T04_good_1200.900
SRR6049659Rhizomagastrodiae_C368-T04_good_1226.930
SRR6049660Rhizomagastrodiae_C368-T01_good_1145.830
SRR6049661Rhizomagastrodiae_C368-T04_good_1180.540
SRR6049662Rhizomagastrodiae_C368-T01_good_199.620
SRR6049663Rhizomagastrodiae_C368-T01_good_1131.280
SRR6049664Rhizomagastrodiae_C368-T10_good_1141.690
SRR6049665Rhizomagastrodiae_C368-T10_good_1141.690
SRP279888GastroGastrodia elata tuber 153.88
JuvenJuvenile tuber142.17
Mother_GastroMother tuber of Gastrodia elata 186.10
Mother_JuvenMother tuber of Juvenile 265.87