Detail information of GWHGAAEX016102/evm.TU.scaffold_73.14
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| nr | gi|357114322|ref|XP_003558949.1| | 9.63E-29 | PREDICTED: peroxidase 5-like [Brachypodium distachyon] |
| Swissprot | tr|Q43872|PER64_ARATH | 3.00E-25 | Peroxidase 64 (Precursor) |
| trEMBL | tr|I1HLH8|I1HLH8_BRADI | 7.00E-32 | Uncharacterized protein {ECO:0000313|EnsemblPlants:BRADI2G34717.1} |
| TAIR | AT5G42180 | 9.00E-25 | Peroxidase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000076 | 291919 | 292324 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX016102
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00141.22 | peroxidase | 40 | 108 | 3.20E-16 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00430 | E1.11.1.7 | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Phenylpropanoid biosynthesis | map00940 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0006979 | Biological Process | response to oxidative stress |
| GO:0004601 | Molecular Function | peroxidase activity |
| GO:0020037 | Molecular Function | heme binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 9.700 |
| SRR2545915 | Juvenile tuber | 45.570 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 665.390 |
| SRR5643514 | five period of Gastrodia elata | 312.030 | |
| SRR5643515 | five period of Gastrodia elata | 282.820 | |
| SRR5643524 | five period of Gastrodia elata | 341.600 | |
| SRR5643525 | five period of Gastrodia elata | 1.850 | |
| SRR5643528 | five period of Gastrodia elata | 4.050 | |
| SRR5643658 | five period of Gastrodia elata | 1.540 | |
| SRR5643659 | five period of Gastrodia elata | 2.020 | |
| SRR5643660 | five period of Gastrodia elata | 1.150 | |
| SRR5643661 | five period of Gastrodia elata | 1.140 | |
| SRR5643662 | five period of Gastrodia elata | 0.000 | |
| SRR5643663 | five period of Gastrodia elata | 1.310 | |
| SRR5643664 | five period of Gastrodia elata | 0.540 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 918.890 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 1946.190 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 1576.740 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 802.070 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 788.910 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 522.390 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 319.850 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 1541.350 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 1061.490 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 555.340 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 1521.290 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 1521.290 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 1.73 |
| Juven | Juvenile tuber | 176.07 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 132.81 | |
| Mother_Juven | Mother tuber of Juvenile | 54.75 |