Detail information of GWHGAAEX016103/evm.TU.scaffold_73.15
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| nr | gi|297738951|emb|CBI28196.3| | 4.18E-118 | unnamed protein product [Vitis vinifera] |
| Swissprot | tr|A7QEU4|PER5_VITVI | 7.00E-97 | Peroxidase 5 {ECO:0000250|UniProtKB:P22195} (Precursor) |
| trEMBL | tr|D1MPT2|D1MPT2_ROYRE | 3.00E-107 | Royal Palm Tree Peroxidase {ECO:0000313|PDB:3HDL} |
| trEMBL | tr|D1MPT2|D1MPT2_ROYRE | 4.00E-59 | Royal Palm Tree Peroxidase {ECO:0000313|PDB:3HDL} |
| trEMBL | tr|D1MPT2|D1MPT2_ROYRE | 3.00E-39 | Royal Palm Tree Peroxidase {ECO:0000313|PDB:3HDL} |
| TAIR | AT5G14130 | 2.00E-80 | Peroxidase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000076 | 292352 | 303196 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX016103
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00141.22 | peroxidase | 1 | 166 | 3.90E-33 |
| PF00141.22 | peroxidase | 176 | 332 | 8.50E-25 |
| PF00141.22 | peroxidase | 389 | 638 | 5.40E-66 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00430 | E1.11.1.7 | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Phenylpropanoid biosynthesis | map00940 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0006979 | Biological Process | response to oxidative stress |
| GO:0042744 | Biological Process | hydrogen peroxide catabolic process |
| GO:0004601 | Molecular Function | peroxidase activity |
| GO:0020037 | Molecular Function | heme binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 0.480 |
| SRR2545915 | Juvenile tuber | 3.400 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 66.130 |
| SRR5643514 | five period of Gastrodia elata | 38.170 | |
| SRR5643515 | five period of Gastrodia elata | 25.510 | |
| SRR5643524 | five period of Gastrodia elata | 42.780 | |
| SRR5643525 | five period of Gastrodia elata | 0.000 | |
| SRR5643528 | five period of Gastrodia elata | 0.460 | |
| SRR5643658 | five period of Gastrodia elata | 0.000 | |
| SRR5643659 | five period of Gastrodia elata | 0.190 | |
| SRR5643660 | five period of Gastrodia elata | 0.370 | |
| SRR5643661 | five period of Gastrodia elata | 0.480 | |
| SRR5643662 | five period of Gastrodia elata | 0.100 | |
| SRR5643663 | five period of Gastrodia elata | 0.230 | |
| SRR5643664 | five period of Gastrodia elata | 0.130 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 43.300 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 58.300 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 60.110 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 32.870 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 5.370 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 3.450 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 8.440 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 5.010 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 14.650 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 2.930 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 91.620 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 91.620 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 0.29 |
| Juven | Juvenile tuber | 4.96 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 1.30 | |
| Mother_Juven | Mother tuber of Juvenile | 3.38 |