Detail information of GWHGAAEX016107/evm.TU.scaffold_73.20


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|389878861|ref|YP_006372426.1|0dihydrolipoamide dehydrogenase [Tistrella mobilis KA081020-065]
KOGKOG13350Dihydrolipoamide dehydrogenase
nrgi|695073151|ref|XP_009383728.1|0PREDICTED: dihydrolipoyl dehydrogenase, mitochondrial-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q9M5K3|DLDH1_ARATH0Dihydrolipoyl dehydrogenase 1, mitochondrial (Precursor)
trEMBLtr|Q6QJL7|Q6QJL7_CAPAN0Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}
TAIRAT1G480300mitochondrial lipoamide dehydrogenase 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000076409769416012-
Transcript Sequence

Network for GWHGAAEX016107

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07992.13Pyr_redox_2383622.20E-67
PF02852.21Pyr_redox_dim3814905.80E-40
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00382DLD, lpd, pdhD Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Biosynthesis of antibioticsmap01130
Carbon metabolismmap01200
Glycolysis / Gluconeogenesismap00010
Citrate cycle (TCA cycle)map00020
Pyruvate metabolismmap00620
Glyoxylate and dicarboxylate metabolismmap00630
Propanoate metabolismmap00640
Pyrimidine metabolismmap00240
Cysteine and methionine metabolismmap00270
Lysine degradationmap00310
Tryptophan metabolismmap00380

Gene Ontology

GO term OntologyName
GO:0045454Biological Processcell redox homeostasis
GO:0055114Biological Processoxidation-reduction process
GO:0009055Molecular Functionelectron carrier activity
GO:0004148Molecular Functiondihydrolipoyl dehydrogenase activity
GO:0016668Molecular Functionoxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor
GO:0016491Molecular Functionoxidoreductase activity
GO:0050660Molecular Functionflavin adenine dinucleotide binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms42.340
SRR2545915Juvenile tuber59.560
SRP108465SRR5643513five period of Gastrodia elata180.100
SRR5643514five period of Gastrodia elata205.230
SRR5643515five period of Gastrodia elata174.270
SRR5643524five period of Gastrodia elata199.810
SRR5643525five period of Gastrodia elata201.500
SRR5643528five period of Gastrodia elata246.450
SRR5643658five period of Gastrodia elata183.280
SRR5643659five period of Gastrodia elata160.210
SRR5643660five period of Gastrodia elata160.090
SRR5643661five period of Gastrodia elata174.630
SRR5643662five period of Gastrodia elata149.780
SRR5643663five period of Gastrodia elata144.460
SRR5643664five period of Gastrodia elata138.320
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1167.180
SRR6049655Rhizomagastrodiae_C368-T10_good_188.740
SRR6049656Rhizomagastrodiae_C368-T07_good_1220.150
SRR6049657Rhizomagastrodiae_C368-T07_good_1132.840
SRR6049658Rhizomagastrodiae_C368-T04_good_1162.730
SRR6049659Rhizomagastrodiae_C368-T04_good_1148.410
SRR6049660Rhizomagastrodiae_C368-T01_good_1167.640
SRR6049661Rhizomagastrodiae_C368-T04_good_1165.700
SRR6049662Rhizomagastrodiae_C368-T01_good_1253.460
SRR6049663Rhizomagastrodiae_C368-T01_good_1254.220
SRR6049664Rhizomagastrodiae_C368-T10_good_1260.090
SRR6049665Rhizomagastrodiae_C368-T10_good_1260.090
SRP279888GastroGastrodia elata tuber 144.10
JuvenJuvenile tuber115.07
Mother_GastroMother tuber of Gastrodia elata 158.58
Mother_JuvenMother tuber of Juvenile 119.01