Detail information of GWHGAAEX016113/evm.TU.scaffold_73.26


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG19011.00E-129Uncharacterized high-glucose-regulated protein
nrgi|720066391|ref|XP_010276505.1|8.45E-162PREDICTED: uncharacterized protein LOC104611230 [Nelumbo nucifera]
Swissprottr|A9LNK9|CPSF_ARATH2.00E-0930-kDa cleavage and polyadenylation specificity factor 30 {ECO:0000303|PubMed:18479511}
trEMBLtr|F6HE16|F6HE16_VITVI1.00E-154Putative uncharacterized protein {ECO:0000313|EMBL:CCB50274.1}
TAIRAT1G481101.00E-129evolutionarily conserved C-terminal region 7

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000076586157588389-
Transcript Sequence

Network for GWHGAAEX016113

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04146.14YTH3104513.90E-38
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003723Molecular FunctionRNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms79.000
SRR2545915Juvenile tuber63.340
SRP108465SRR5643513five period of Gastrodia elata93.670
SRR5643514five period of Gastrodia elata84.430
SRR5643515five period of Gastrodia elata88.530
SRR5643524five period of Gastrodia elata81.990
SRR5643525five period of Gastrodia elata164.020
SRR5643528five period of Gastrodia elata133.900
SRR5643658five period of Gastrodia elata105.190
SRR5643659five period of Gastrodia elata91.170
SRR5643660five period of Gastrodia elata100.600
SRR5643661five period of Gastrodia elata95.410
SRR5643662five period of Gastrodia elata119.070
SRR5643663five period of Gastrodia elata99.580
SRR5643664five period of Gastrodia elata179.360
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_189.950
SRR6049655Rhizomagastrodiae_C368-T10_good_199.570
SRR6049656Rhizomagastrodiae_C368-T07_good_1102.790
SRR6049657Rhizomagastrodiae_C368-T07_good_174.060
SRR6049658Rhizomagastrodiae_C368-T04_good_196.730
SRR6049659Rhizomagastrodiae_C368-T04_good_196.470
SRR6049660Rhizomagastrodiae_C368-T01_good_187.740
SRR6049661Rhizomagastrodiae_C368-T04_good_191.290
SRR6049662Rhizomagastrodiae_C368-T01_good_1109.650
SRR6049663Rhizomagastrodiae_C368-T01_good_1116.200
SRR6049664Rhizomagastrodiae_C368-T10_good_1116.820
SRR6049665Rhizomagastrodiae_C368-T10_good_1116.820
SRP279888GastroGastrodia elata tuber 93.66
JuvenJuvenile tuber48.67
Mother_GastroMother tuber of Gastrodia elata 105.51
Mother_JuvenMother tuber of Juvenile 82.96