Detail information of GWHGAAEX016115/evm.TU.scaffold_73.28


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|283782235|ref|YP_003372990.1|7.00E-22stress responsive alpha-beta barrel domain-containing protein [Pirellula staleyi DSM 6068]
nrgi|115437030|ref|NP_001043194.1|4.11E-51Os01g0516600 [Oryza sativa Japonica Group]
Swissprottr|Q9LUV2|POP3_ARATH1.00E-48Probable protein Pop3
trEMBLtr|B8A9C0|B8A9C0_ORYSI2.00E-51Putative uncharacterized protein {ECO:0000313|EMBL:EEC70761.1}
TAIRAT3G172105.00E-48heat stable protein 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000076606069612487-
Transcript Sequence

Network for GWHGAAEX016115

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07876.11Dabb3984.00E-28
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms135.760
SRR2545915Juvenile tuber136.050
SRP108465SRR5643513five period of Gastrodia elata222.420
SRR5643514five period of Gastrodia elata292.450
SRR5643515five period of Gastrodia elata232.640
SRR5643524five period of Gastrodia elata302.790
SRR5643525five period of Gastrodia elata240.720
SRR5643528five period of Gastrodia elata171.040
SRR5643658five period of Gastrodia elata215.300
SRR5643659five period of Gastrodia elata102.220
SRR5643660five period of Gastrodia elata133.430
SRR5643661five period of Gastrodia elata170.600
SRR5643662five period of Gastrodia elata97.070
SRR5643663five period of Gastrodia elata99.360
SRR5643664five period of Gastrodia elata106.670
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1179.420
SRR6049655Rhizomagastrodiae_C368-T10_good_1369.880
SRR6049656Rhizomagastrodiae_C368-T07_good_1203.110
SRR6049657Rhizomagastrodiae_C368-T07_good_1177.130
SRR6049658Rhizomagastrodiae_C368-T04_good_1179.950
SRR6049659Rhizomagastrodiae_C368-T04_good_1164.290
SRR6049660Rhizomagastrodiae_C368-T01_good_1155.390
SRR6049661Rhizomagastrodiae_C368-T04_good_1195.710
SRR6049662Rhizomagastrodiae_C368-T01_good_1196.900
SRR6049663Rhizomagastrodiae_C368-T01_good_1194.360
SRR6049664Rhizomagastrodiae_C368-T10_good_1236.110
SRR6049665Rhizomagastrodiae_C368-T10_good_1236.110
SRP279888GastroGastrodia elata tuber 205.94
JuvenJuvenile tuber169.50
Mother_GastroMother tuber of Gastrodia elata 129.22
Mother_JuvenMother tuber of Juvenile 144.96