Detail information of GWHGAAEX016129/evm.TU.scaffold_73.43


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743768578|ref|XP_010914566.1|4.33E-43PREDICTED: LOW QUALITY PROTEIN: ocs element-binding factor 1-like [Elaeis guineensis]
Swissprottr|P24068|OCS1_MAIZE2.00E-28Ocs element-binding factor 1
trEMBLtr|W1P3A9|W1P3A9_AMBTC2.00E-38Uncharacterized protein {ECO:0000313|EMBL:ERN02129.1}
TAIRAT3G624208.00E-33basic region/leucine zipper motif 53

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007610464731046871-
Transcript Sequence

Network for GWHGAAEX016129

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00170.20bZIP_110544.80E-09
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilybZIP

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms33.190
SRR2545915Juvenile tuber20.570
SRP108465SRR5643513five period of Gastrodia elata41.250
SRR5643514five period of Gastrodia elata23.210
SRR5643515five period of Gastrodia elata17.270
SRR5643524five period of Gastrodia elata22.410
SRR5643525five period of Gastrodia elata87.480
SRR5643528five period of Gastrodia elata64.820
SRR5643658five period of Gastrodia elata54.610
SRR5643659five period of Gastrodia elata12.610
SRR5643660five period of Gastrodia elata14.470
SRR5643661five period of Gastrodia elata13.430
SRR5643662five period of Gastrodia elata18.600
SRR5643663five period of Gastrodia elata17.440
SRR5643664five period of Gastrodia elata12.140
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_115.000
SRR6049655Rhizomagastrodiae_C368-T10_good_143.260
SRR6049656Rhizomagastrodiae_C368-T07_good_123.820
SRR6049657Rhizomagastrodiae_C368-T07_good_133.140
SRR6049658Rhizomagastrodiae_C368-T04_good_149.170
SRR6049659Rhizomagastrodiae_C368-T04_good_177.400
SRR6049660Rhizomagastrodiae_C368-T01_good_117.660
SRR6049661Rhizomagastrodiae_C368-T04_good_154.310
SRR6049662Rhizomagastrodiae_C368-T01_good_118.760
SRR6049663Rhizomagastrodiae_C368-T01_good_117.360
SRR6049664Rhizomagastrodiae_C368-T10_good_121.560
SRR6049665Rhizomagastrodiae_C368-T10_good_121.560
SRP279888GastroGastrodia elata tuber 20.62
JuvenJuvenile tuber7.89
Mother_GastroMother tuber of Gastrodia elata 393.09
Mother_JuvenMother tuber of Juvenile 70.03